RPSBLAST alignment of GI: 254780855 and SCOP domain: d1frfl_

Alignment

 Score = 94.9 bits (235), Expect = 1e-20
 Identities = 35/341 (10%), Positives = 74/341 (21%), Gaps = 75/341 (21%)

Query: 112 HLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDIPPELVE 171
           H        +++ A    L     + K         G   H  +   GG          +
Sbjct: 182 HKAYYLPPEVNLIATAHYLEALHMQVKAASAMAILGGKNPHTQFTVVGGCSNYQGLT-KD 240

Query: 172 DIGCWCDSFPSALNDISDLL---------------------------------------T 192
            +  +          +++                                          
Sbjct: 241 PLANYLALSKEVCQFVNECYIPDLLAVAGFYKDWGGIGGTSNYLAFGEFATDDSSPEKHL 300

Query: 193 GNRIFKQRNVNIGTVKLEDAWGWGFSGVMIRGSGAAWDLRKSQPYECYSELDFDIPIGKH 252
               F    +    +   D    G     ++ S  A       PY+  ++  +     K 
Sbjct: 301 ATSQFPSGVITGRDLGKVDNVDLGAIYEDVKYSWYAPGGDGKHPYDGVTDPKYTKLDDKD 360

Query: 253 GDCYDRYLVRMMEMRESVKIIRQCVN-------------RLLGKNKVGPVSASDP----- 294
              + +      +  E   + R  +               +LGK  V   +         
Sbjct: 361 HYSWMKAPRYKGKAMEVGPLARTFIAYAKGQPDFKKVVDMVLGKLSVPATALHSTLGRTA 420

Query: 295 -------KIVPPKRADMKRSMESLIHHFKLYTEGYHVPVGEVYAAVEAPKGEFGVYLISD 347
                   +       +K   +S      L  +       +     +AP+G    ++   
Sbjct: 421 ARGIETAIVCANMEKWIKEMADSGAKDNTLCAKWEMPEESKGVGLADAPRGSLSHWIRIK 480

Query: 348 GGNKPYRCKIRAP---------GYAHLQAMEFLCKGHQLAD 379
           G  K    ++  P                +E    G  +AD
Sbjct: 481 GK-KIDNFQLVVPSTWNLGPRGPQGDKSPVEEALIGTPIAD 520

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: HydB/Nqo4-like
superfamily: HydB/Nqo4-like
family: Nickel-iron hydrogenase, large subunit
domain: Nickel-iron hydrogenase, large subunit
species: Desulfovibrio fructosovorans [TaxId: 878]