RPSBLAST alignment of GI: 254780855 and SCOP domain: d1wuil1

Alignment
>d1wuil1 e.18.1.1 (L:19-552) Nickel-iron hydrogenase, large subunit {Desulfovibrio vulgaris [TaxId: 881]} Length = 534
 Score =  103 bits (257), Expect = 3e-23
 Identities = 56/444 (12%), Positives = 108/444 (24%), Gaps = 80/444 (18%)

Query: 18  PAAHGVLRLILELDGEIVERVDPHI---GLLHRGTEKLIETKTFLQAVPYFDRLDYVAPM 74
             A  +  L+L       + +  HI     LH      +                 ++P 
Sbjct: 88  KNATYIRNLVLGA-----QYLHDHIVHFYHLHALDFVDVTAALKADPAKAAKVASSISPR 142

Query: 75  NQEHAYALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGALTPPLWGFE 134
               A   AV+  L   +             +G   ++ L       ++ A    L    
Sbjct: 143 KTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYL---DPETNLIATAHYLEALR 199

Query: 135 EREKLMVFYERASGSRMHAAYFRPGGVHQDIPP---------ELVEDIGCWCDSFPSALN 185
            + K             H  +   GGV                L ++   + D       
Sbjct: 200 LQVKAARAMAVFGAKNPHTQFTVVGGVTCYDALTPQRIAEFEALWKETKAFVDEVYIPDL 259

Query: 186 DIS--------------------DLLTGNRIFKQRNVNIGTVKLEDAWGWGFSGVMIRGS 225
            +                     +          R    G V   D         M    
Sbjct: 260 LVVAAAYKDWTQYGGTDNFITFGEFPKDEYDLNSRFFKPGVVFKRDFKNIKPFDKMQIEE 319

Query: 226 GAAWDLRK----SQPYECYSELDFDIPIGKHGDCYD---RYLVRMMEMRESVKIIRQC-- 276
                  +      P++  ++  +    G     +    RY+   ME     +++     
Sbjct: 320 HVRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPRYMGEPMETGPLAQVLIAYSQ 379

Query: 277 --------VNRLLGKNKVGPVSASDP------------KIVPPKRADMKRSMESLIHHFK 316
                    + +L K  VGP +                 I       ++   +++     
Sbjct: 380 GHPKVKAVTDAVLAKLGVGPEALFSTLGRTAARGIETAVIAEYVGVMLQEYKDNIAKGDN 439

Query: 317 LYTEGYHVPV-GEVYAAVEAPKGEFGVYLISDGGNKPYRCKIRAP---------GYAHLQ 366
           +    + +P   E    V AP+G    ++  + G K    ++  P             L 
Sbjct: 440 VICAPWEMPKQAEGVGFVNAPRGGLSHWIRIEDG-KIGNFQLVVPSTWTLGPRCDKNKLS 498

Query: 367 AMEFLCKGHQLADVSAILGSLDIV 390
            +E    G  +AD    +  L  V
Sbjct: 499 PVEASLIGTPVADAKRPVEILRTV 522

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: HydB/Nqo4-like
superfamily: HydB/Nqo4-like
family: Nickel-iron hydrogenase, large subunit
domain: Nickel-iron hydrogenase, large subunit
species: Desulfovibrio vulgaris [TaxId: 881]