HHsearch results for GI: 254780856 and protein with PDBid: 3i9v_2
>3i9v_2 NADH-quinone oxidoreductase subunit 2; electron transport, respiratory chain, 4Fe- 4S, cell membrane, flavoprotein, FMN, iron; HET: FMN; 3.10A {Thermus thermophilus HB8} PDB: 2fug_2* 3iam_2* 3ias_2* 3m9s_2*
Probab=100.00 E-value=0 Score=375.22 Aligned_cols=162 Identities=32% Similarity=0.677 Sum_probs=156.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 56589999999999986784321336999999999982668999999999850887999999997644320222787069
Q gi|254780856|r 16 FSFSEESAIWVNEVISRYPPSRCQSAVIPLLMRAQEQEGWVSRAAIEVVANILDMAYIRVLEIATFYTQFQLSPVGTRAH 95 (218)
Q Consensus 16 f~fs~e~~~~i~~ii~~yP~~~~~salip~L~~vQ~~~G~Ip~eai~~iA~~L~i~~~~V~~VaTFY~~f~~~P~G~k~~ 95 (218)
+.|+++..+.|++||++||.+++|++|||+||.+|+++||||++++++||+.|++|+++||+|||||+||+++|+| ||+
T Consensus 1 m~~~~~~~~~i~~ii~~Yp~~~~r~all~~L~~iQ~~~GyIp~~al~~iA~~l~v~~a~V~~vatFY~~f~~~p~g-k~~ 79 (181)
T 3i9v_2 1 MGFFDDKQDFLEETFAKYPPEGRRAAIMPLLRRVQQEEGWIRPERIEEIARLVGTTPTEVMGVASFYSYYQFVPTG-KYH 79 (181)
T ss_dssp --CTTTCHHHHHHHHTTSCTTCCGGGHHHHHHHHHHHHSSCCHHHHHHHHHHHTSCHHHHHHHHTTCSSCCSSCCC-SEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC-CEE
T ss_conf 9988889999999998788864776999999999998299099999999999892999999999762502358898-868
Q ss_pred EEECCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCHHH-CCCCHHHHHHHHHHHHC
Q ss_conf 99618835877089248999998827564751778818999532456677886799858341-45889899999999982
Q gi|254780856|r 96 VQVCGTTPCMLRGCEKLIEVCRNKIHQKPLHRNSDGTLSWEEVECQGACVNAPMVMIGKDTY-EDLTPERLEEIIDAFST 174 (218)
Q Consensus 96 I~VC~~~~C~l~G~~~l~~~l~~~Lgi~~gett~DG~ftLe~v~CLG~C~~AP~~~Vn~~~y-~~lt~e~~~~il~~Lr~ 174 (218)
|+||++++|+++|+++|+++++++|||+.|+||+||+|||++++|||+|++||+|+||++.| ++||++++++||+.||+
T Consensus 80 i~VC~~~~C~~~Ga~~l~~~l~~~Lgi~~gett~Dg~ftle~~~ClG~C~~AP~v~Vn~~~y~~~lt~e~~~~il~~lr~ 159 (181)
T 3i9v_2 80 LQVCATLSCKLAGAEELWDYLTETLGIGPGEVTPDGLFSVQKVECLGSCHTAPVIQVNDEPYVECVTRARLEALLAGLRA 159 (181)
T ss_dssp EEEECSHHHHTTTHHHHHHHHHHHHTCCTTCCCTTSCEEEEEESCCSCGGGCSCEECSSSCCBCCCCHHHHHHHHHHHHT
T ss_pred EEECCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEECCCCEEEECCEEECCCCCHHHHHHHHHHHHC
T ss_conf 99559768775788689999999819999967899868764221768607898499989873587999999999999986
Q ss_pred CCCC
Q ss_conf 8899
Q gi|254780856|r 175 GQGD 178 (218)
Q Consensus 175 gk~~ 178 (218)
|+..
T Consensus 160 g~~~ 163 (181)
T 3i9v_2 160 GKRL 163 (181)
T ss_dssp TCCG
T ss_pred CCCC
T ss_conf 9999