BLAST/PSIBLAST alignment of GI: 254780856 and GI: 209548867 at iteration 1
>gi|209548867|ref|YP_002280784.1| NADH dehydrogenase subunit E [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 388
>gi|209534623|gb|ACI54558.1| NADH-quinone oxidoreductase, E subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 388
 Score =  336 bits (861), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 154/215 (71%), Positives = 180/215 (83%)

Query: 1   MSVRRLAEEEFQPSSFSFSEESAIWVNEVISRYPPSRCQSAVIPLLMRAQEQEGWVSRAA 60
           MSVRRLAE++FQP++F+FS+E+A+W ++ I +YP  R QSAVIPLLMRAQEQ+GWV+RAA
Sbjct: 1   MSVRRLAEDQFQPAAFAFSDENAVWADKTIQKYPAGRQQSAVIPLLMRAQEQDGWVTRAA 60

Query: 61  IEVVANILDMAYIRVLEIATFYTQFQLSPVGTRAHVQVCGTTPCMLRGCEKLIEVCRNKI 120
           IE +A++LDMAYIRVLE+ATFYTQFQL PVGTRAHVQVCGTTPCMLRG E L+ VC++KI
Sbjct: 61  IEKIADMLDMAYIRVLEVATFYTQFQLHPVGTRAHVQVCGTTPCMLRGSEALMSVCKSKI 120

Query: 121 HQKPLHRNSDGTLSWEEVECQGACVNAPMVMIGKDTYEDLTPERLEEIIDAFSTGQGDTI 180
           H     RN++GTLSWEEVEC GACVNAPMVMIGKDTYEDLTP RLEEIID F+ G G +I
Sbjct: 121 HAHAFERNAEGTLSWEEVECLGACVNAPMVMIGKDTYEDLTPARLEEIIDTFAAGNGASI 180

Query: 181 RPGPQIDRISSAPAGGLTSLLDNNSKKRGKKKKDD 215
           +PG QIDRI SAP GG TSL     K R + KK D
Sbjct: 181 KPGTQIDRIFSAPEGGPTSLTTEEPKARTRAKKAD 215