HHsearch alignment for GI: 254780858 and conserved domain: TIGR03027
>TIGR03027 pepcterm_export putative polysaccharide export protein, PEP-CTERM sytem-associated. This protein family belongs to the larger set of polysaccharide biosynthesis/export proteins described by pfam02563. Members of this family are variable in either containing of lacking a 78-residue insert, but appear to fall within a single clade, nevertheless, where the regions in which the gene is found encode components of the PEP-CTERM/EpsH proposed exosortase protein sorting system.
Probab=94.65 E-value=0.11 Score=31.47 Aligned_cols=80 Identities=18% Similarity=0.189 Sum_probs=50.2
Q ss_pred EEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCC-----CC
Q ss_conf 4764267887872689358987999999861556787110048985245656532100245633422011038-----73
Q gi|254780858|r 240 KLFSISGHVNYPCTVEESMSITFDELIEKHCGGIRGGWDNLLAVIPGGSSVPCLPAGQMRGAIMDYDGLKEMG-----SG 314 (425)
Q Consensus 240 kl~tvsG~V~~Pg~~evp~Gt~l~eli~~~~GG~~~~~~~~kav~~GG~~~g~l~~~~ld~~~ld~~~l~~~G-----s~ 314 (425)
T Consensus 79 ~~V~V~G~V~~Pg~~~~~~~~tl~~al~-~AGG~~~~a~~~~i~i~R~~~g~~------~~~~vdl~~~l~~g~~~~n~~ 151 (165)
T TIGR03027 79 EQIRVVGAAANPQALPYREGMTLLDVMI-AVGGLTDFADGNRAVIVRTVDGEQ------KQISVRLKDLIKDGDVTANVE 151 (165)
T ss_pred EEEEEEEEECCCCEEECCCCCHHHHHHH-HCCCCCCCCCCCEEEEEEECCCCE------EEEEEEHHHHHHCCCCCCCCE
T ss_conf 7999981343782575488861999999-827998668875699999069977------999999999976698778947
Q ss_pred CCCCEEEEECCC
Q ss_conf 466517994286
Q gi|254780858|r 315 LGTAAVIVMDRS 326 (425)
Q Consensus 315 LGsg~iiV~de~ 326 (425)
T Consensus 152 L~~GDvI~VP~s 163 (165)
T TIGR03027 152 LKPGDVLIIPES 163 (165)
T ss_pred ECCCCEEEECCC
T ss_conf 589999998166