HHsearch alignment for GI: 254780858 and conserved domain: pfam01512
>pfam01512 Complex1_51K Respiratory-chain NADH dehydrogenase 51 Kd subunit.
Probab=100.00 E-value=0 Score=346.46 Aligned_cols=149 Identities=46% Similarity=0.724 Sum_probs=137.9
Q ss_pred HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 99839776875711245568742356568861999857677848600489998625899999999999718363899815
Q gi|254780858|r 47 VKASGLRGRGGAGFSTGMKWSFMPKVCSDRPHYLVVNADESEPGTCKDRDIMRHEPHTLIEGCVIASFAIGAHCAFIYVR 126 (425)
Q Consensus 47 v~~sgl~GrGGAgFPt~~Kw~~~~~~~~~~~~yvv~N~~E~EPgt~kDr~Ll~~~p~~vieG~~i~a~a~gA~~~~I~ir 126 (425)
T Consensus 1 i~~agivG~GGAgFPt~~Kl~~~~~---~~~~~livN~~EcEP~~~~D~~lm~~~p~~vl~G~~i~~~a~ga~~~~I~I~ 77 (150)
T pfam01512 1 IKEAGIVGRGGAGFPTHVKLSPPAD---KKIKYLIVNGAECEPGLTKDRRLMRERPHEIIEGILIAAYALGAKKGVIGIE 77 (150)
T ss_pred CCCCCCCCCCCCCCCCHHHCCCCCC---CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 9401546676665300122346657---8997899967879843579823788758999999999999859898999982
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55178999999999999868997767678866406997457510011078899863089998688899862278303785
Q gi|254780858|r 127 GEFIRERESLQAAVDECYASGLLGSNSKLGYDVDIIVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANVGLYGCPT 206 (425)
Q Consensus 127 ~ey~~~~~~l~~ai~ea~~~g~lg~~~~~g~~~~i~v~~g~g~Yi~GeEtali~sieG~r~~Pr~kPP~p~~~Gl~g~PT 206 (425)
T Consensus 78 ~~~~~ai~~l~~ai~~~~~~~------------~i~V~~~~~~Yp~GeE~~Li~~l~Gr-~vP~~~~--P~~~G~----- 137 (150)
T pfam01512 78 DNKPEAIAALEKAIAEAPAAG------------DIEVVLLPGKYPCGEEKALIYSLTGR-EVPRGGL--PADVGV----- 137 (150)
T ss_pred CCCHHHHHHHHHHHHHHHHCC------------CEEEEECCCCCCCCHHHHHHHHHHCC-CCCCCCC--CCCCCE-----
T ss_conf 688999999999999666639------------88999899867546799999998699-7798979--865785-----
Q ss_pred CCCCHHHHHHHH
Q ss_conf 000289999999
Q gi|254780858|r 207 TVNNVESIAVVP 218 (425)
Q Consensus 207 ~V~NVeTla~v~ 218 (425)
T Consensus 138 vV~NVeT~~~V~ 149 (150)
T pfam01512 138 VVNNVETLAAVP 149 (150)
T ss_pred EEECHHHHHHCC
T ss_conf 998589984265