HHsearch alignment for GI: 254780859 and conserved domain: CHL00014

>CHL00014 ndhI NADH dehydrogenase subunit I.
Probab=98.78  E-value=4.4e-09  Score=84.62  Aligned_cols=83  Identities=19%  Similarity=0.372  Sum_probs=58.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCHHCCCHHHCCCCCHHHHHHHHCCCCCCEEE-ECCCCCC-EEEECCCCCCCCCCCCCEEECC
Q ss_conf             8674777567787888560210064329010023645432068740033-3066641-2662058755565466222012
Q gi|254780859|r  131 GSSRYSEEKRAVEDKSIGPLVKTVMNRCIHCTRCVRFITEVAGVSELGL-VGRGENA-EITTYLEQSLTSEMQGNIIDLC  208 (700)
Q Consensus       131 ~~~r~~~~k~~~~~~~~~p~i~~d~~rCI~C~RCVR~c~Ev~g~~~lg~-~~RG~~~-~i~~~~~~~~~~e~~Gncvd~C  208 (700)
T Consensus        38 vTiqYP~ek~~~~~RfRG-ri~~~~dkCI~C~~C~~vCP~--~~i~Vd~~~~~~~~kK~~~~y~ID~grCIFCG~CvEaC  114 (173)
T CHL00014         38 VTIQYPYEKLITSERFRG-RIHFEFDKCIACEVCVRVCPI--DLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYC  114 (173)
T ss_pred             CCCCCCCCCCCCCCCCCC-EEECCCCCCCCHHHHHHHCCC--CCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf             411398888889988687-000584117244369865977--76163355678888501146775616213036711017


Q ss_pred             CCCCCCCC
Q ss_conf             12101223
Q gi|254780859|r  209 PVGALTSK  216 (700)
Q Consensus       209 PvGALt~k  216 (700)
T Consensus       115 PtdAI~mT  122 (173)
T CHL00014        115 PTNCLSMT  122 (173)
T ss_pred             CCCCCCCC
T ss_conf             86803356