HHsearch alignment for GI: 254780859 and conserved domain: COG0479
>COG0479 FrdB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion].
Probab=98.52 E-value=8.1e-08 Score=75.47 Aligned_cols=163 Identities=24% Similarity=0.350 Sum_probs=94.3
Q ss_pred EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEE-----EEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEE
Q ss_conf 99968887588999986895461212799964560004-----7999717988702002656645663766685-37981
Q gi|254780859|r 13 EIEVPSGFTILQACELAGAEIPRFCFHERLSIAGNCRM-----CLVEIKGIASKPQASCAMNVSDLRAGPNGEL-PEVFT 86 (700)
Q Consensus 13 ~v~v~~g~til~a~~~~gi~IP~~Cy~~~l~~~g~CRm-----ClVeve~~~~k~~~sC~t~v~~gm~~~~~~g-~~v~t 86 (700)
T Consensus 23 ev~~~~~~~vLdaL~~Ik~e-----~d~~Lsfr~sCR~gICGSCam~ING-~prL--AC~t~~~~~~-----~~~i~ie- 88 (234)
T COG0479 23 EVPYDEGMTVLDALLYIKEE-----QDPTLSFRRSCREGICGSCAMNING-KPRL--ACKTLMKDLE-----EGVITIE- 88 (234)
T ss_pred EECCCCCCCHHHHHHHHHHH-----CCCCCCHHHHCCCCCCCCCEEEECC-CCCC--CHHHHHHHCC-----CCCEEEE-
T ss_conf 83388998399999999972-----5996003552107768866457998-2645--3122164556-----7836986-
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCHH--------CCCHH
Q ss_conf 99899999999999998278998-877888788837-998998389867477756778788856021--------00643
Q gi|254780859|r 87 KSSMVKKARAGVMEFLLINHPLD-CPICDQGGECDL-QDQAIFFGFGSSRYSEEKRAVEDKSIGPLV--------KTVMN 156 (700)
Q Consensus 87 ~s~~v~~~r~~vle~ll~nHpld-Cp~Cd~~GeC~L-Qd~~~~~g~~~~r~~~~k~~~~~~~~~p~i--------~~d~~ 156 (700)
T Consensus 89 --------------------PL~~fpV-----IkDLVVD~~~f~~~~~~ikp~~~~~-~~~~~~~~~qspe~~~~~~~~~ 142 (234)
T COG0479 89 --------------------PLPNFPV-----IRDLVVDMEEFYEKLRKIKPYLIRD-DEPDPGERLQSPEEREKLDELS 142 (234)
T ss_pred --------------------ECCCCCC-----EEEEEECCHHHHHHHHCCCCCEECC-CCCCCCCCCCCHHHHHHHHHHH
T ss_conf --------------------7789983-----0122533289987534156605557-6678753337999999997554
Q ss_pred HCCCCCHHHHHHHHCCCCC------CEE------EECCC----CCCEEEECCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 2901002364543206874------003------33066----64126620587555654662220121210122
Q gi|254780859|r 157 RCIHCTRCVRFITEVAGVS------ELG------LVGRG----ENAEITTYLEQSLTSEMQGNIIDLCPVGALTS 215 (700)
Q Consensus 157 rCI~C~RCVR~c~Ev~g~~------~lg------~~~RG----~~~~i~~~~~~~~~~e~~Gncvd~CPvGALt~ 215 (700)
T Consensus 143 ~CI~Cg~C~s~CP~~~~~~~f~GPa~l~~a~R~~~D~rd~~~~~R~~~~~~~~gv~~C~~~~~C~~vCPK~i~p~ 217 (234)
T COG0479 143 ECILCGCCTAACPSIWWNPDFLGPAALRQAYRFLADSRDEGTAERLKILEDPDGVWRCTTCGNCTEVCPKGIPPA 217 (234)
T ss_pred HCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHH
T ss_conf 362144404228753236577688999999998549765341889985047887752616152314289999979