HHsearch alignment for GI: 254780859 and conserved domain: COG2878

Probab=97.38  E-value=5.4e-05  Score=55.07  Aligned_cols=104  Identities=18%  Similarity=0.349  Sum_probs=70.4

Q ss_pred             CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHCCCCCHHHHHHHHCCCCCCEEEECCCCCCEEEECC
Q ss_conf             88878883799899838986747775677878885602100643290100236454320687400333066641266205
Q gi|254780859|r  113 CDQGGECDLQDQAIFFGFGSSRYSEEKRAVEDKSIGPLVKTVMNRCIHCTRCVRFITEVAGVSELGLVGRGENAEITTYL  192 (700)
Q Consensus       113 Cd~~GeC~LQd~~~~~g~~~~r~~~~k~~~~~~~~~p~i~~d~~rCI~C~RCVR~c~Ev~g~~~lg~~~RG~~~~i~~~~  192 (700)
T Consensus        74 C~PGG~~vi~kI~elLgvep~~~~~~~--~~~~~~~~va~i~e~~ciGCtkCiqaCp----vdAivg~~~~mhtv~~d--  145 (198)
T COG2878          74 CAPGGEAVIRKIAELLGVEPPPADGSE--HGEEQARMVALIDEANCIGCTKCIQACP----VDAIVGATKAMHTVIAD--  145 (198)
T ss_pred             CCCCCHHHHHHHHHHHCCCCCCCCHHH--HHCCCCCEEEEECCHHCCCCHHHHHHCC----HHHHHCCCHHHHHHHHH--
T ss_conf             899968999999999668888863165--5314544046751220144398998497----14431253257898998--


Q ss_pred             CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             875556546622201212101223323334443023
Q gi|254780859|r  193 EQSLTSEMQGNIIDLCPVGALTSKPFAFTGRSWELT  228 (700)
Q Consensus       193 ~~~~~~e~~Gncvd~CPvGALt~k~~~~~~Rpwel~  228 (700)
T Consensus       146 ----lCTGC~lCva~CPtdci~m~~~~~~~~~~kw~  177 (198)
T COG2878         146 ----LCTGCDLCVAPCPTDCIEMQPVAETPDRWKWD  177 (198)
T ss_pred             ----HHCCCCCCCCCCCCCCEEEEECCCCHHHCCCC
T ss_conf             ----84677766587987702452155413313444