HHsearch alignment for GI: 254780859 and conserved domain: PRK05950
>PRK05950 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed.
Probab=98.12 E-value=9.3e-07 Score=67.83 Aligned_cols=168 Identities=22% Similarity=0.287 Sum_probs=82.5
Q ss_pred EEEEEC---CCCCHHHHHHHCCCCC-CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 999968---8875889999868954-612127999645600047999717988702002656645663766685379819
Q gi|254780859|r 12 IEIEVP---SGFTILQACELAGAEI-PRFCFHERLSIAGNCRMCLVEIKGIASKPQASCAMNVSDLRAGPNGELPEVFTK 87 (700)
Q Consensus 12 ~~v~v~---~g~til~a~~~~gi~I-P~~Cy~~~l~~~g~CRmClVeve~~~~k~~~sC~t~v~~gm~~~~~~g~~v~t~ 87 (700)
T Consensus 21 ~~y~v~~~~~~~tvLdaL~~Ik~~~D~slafr~sC-r~giCGSCam~ING-~~~--LAC~t~v~~~~-----~~-~I~-- 88 (235)
T PRK05950 21 QTYEVDVDDCGPMVLDALIKIKNEQDPTLTFRRSC-REGVCGSDAMNING-KNG--LACITPISDLK-----KG-KIV-- 88 (235)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEEEECC-CCC--CCEEEEHHHCC-----CC-CEE--
T ss_conf 99994789999819999999986149975897178-98878767678899-412--23011700248-----99-589--
Q ss_pred CHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCCCCCCCC--CCCH---HCCCHHHCC
Q ss_conf 9899999999999998278998-87788878883799899838986--74777567787888--5602---100643290
Q gi|254780859|r 88 SSMVKKARAGVMEFLLINHPLD-CPICDQGGECDLQDQAIFFGFGS--SRYSEEKRAVEDKS--IGPL---VKTVMNRCI 159 (700)
Q Consensus 88 s~~v~~~r~~vle~ll~nHpld-Cp~Cd~~GeC~LQd~~~~~g~~~--~r~~~~k~~~~~~~--~~p~---i~~d~~rCI 159 (700)
T Consensus 89 -----------ieP-l~~fpVikDLvV---------D~~~~~~~~~~v~p~l~~~~~~~~~e~~~~pe~~~~~~~~~~CI 147 (235)
T PRK05950 89 -----------IRP-LPGLPVIKDLVV---------DMTQFYAQYRSIKPYLINDTPPPAKERLQSPEEREKLDGLYECI 147 (235)
T ss_pred -----------EEC-CCCCCCCCCCEE---------ECHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf -----------953-656984454066---------24999852013753763799998422337988999988687614
Q ss_pred CCCHHHHHHHHCCCCC--CEEE-----EC------C----CCCCEEEECCCCCCCCCCCCCEEECCCCCC
Q ss_conf 1002364543206874--0033-----30------6----664126620587555654662220121210
Q gi|254780859|r 160 HCTRCVRFITEVAGVS--ELGL-----VG------R----GENAEITTYLEQSLTSEMQGNIIDLCPVGA 212 (700)
Q Consensus 160 ~C~RCVR~c~Ev~g~~--~lg~-----~~------R----G~~~~i~~~~~~~~~~e~~Gncvd~CPvGA 212 (700)
T Consensus 148 ~Cg~C~saCp~~~~~~~~flGP~al~~a~r~~~D~Rd~~~~eRl~~l~~~~G~~~C~~~~~C~~vCPK~I 217 (235)
T PRK05950 148 LCACCSTSCPSFWWNPDKFLGPAALLQAYRFIADSRDEATGERLDILDDPFGVFRCHTIMNCVEVCPKGL 217 (235)
T ss_pred HHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
T ss_conf 1211574496650277566088999999875468765029999998607788107989587256287899