HHsearch alignment for GI: 254780859 and conserved domain: PRK07569
>PRK07569 bidirectional hydrogenase complex protein HoxU; Validated.
Probab=100.00 E-value=0 Score=599.13 Aligned_cols=222 Identities=31% Similarity=0.504 Sum_probs=210.9
Q ss_pred CCEEEEECCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10499999999996888758899998689546121279996456000479997179887020026566456637666853
Q gi|254780859|r 3 MMVKLKVDGIEIEVPSGFTILQACELAGAEIPRFCFHERLSIAGNCRMCLVEIKGIASKPQASCAMNVSDLRAGPNGELP 82 (700)
Q Consensus 3 ~mv~~~Idg~~v~v~~g~til~a~~~~gi~IP~~Cy~~~l~~~g~CRmClVeve~~~~k~~~sC~t~v~~gm~~~~~~g~ 82 (700)
T Consensus 2 ~mvtltIdG~~v~v~~G~tILeaa~~~Gi~IP~LCy~~~l~~~G~CR~C~VEveG-~~~lv~sC~t~v~eGM-------- 72 (236)
T PRK07569 2 SVKTLTIDDQLVSAREGETILQAAREAGIPIPTLCHLEGVSDVGACRLCLVEVEG-SNKLLPACVTPVAEGM-------- 72 (236)
T ss_pred CEEEEEECCEEEEECCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEECC-CCCCCCCCCCCCCCCC--------
T ss_conf 7389999999999689895999999859984725468993988866732799899-8531566375889984--------
Q ss_pred EEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHCCCCC
Q ss_conf 79819989999999999999827899887788878883799899838986747775677878885602100643290100
Q gi|254780859|r 83 EVFTKSSMVKKARAGVMEFLLINHPLDCPICDQGGECDLQDQAIFFGFGSSRYSEEKRAVEDKSIGPLVKTVMNRCIHCT 162 (700)
Q Consensus 83 ~v~t~s~~v~~~r~~vle~ll~nHpldCp~Cd~~GeC~LQd~~~~~g~~~~r~~~~k~~~~~~~~~p~i~~d~~rCI~C~ 162 (700)
T Consensus 73 ~V~T~s~~v~~~Rk~~lellL~~H~~dC~~C~~~g~CeLQ~la~~~g~~~~r~~~~~~~~~~d~s~p~i~~D~~rCI~Cg 152 (236)
T PRK07569 73 VVQTNTPRLQEYRRMIVELLFAERNHVCAVCVANGNCELQDLAIEVGMDHVRFPYLFPKRPVDISHPRFGIDHNRCVLCT 152 (236)
T ss_pred EEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
T ss_conf 89929989999999999999972766576346688748999999858987767654677765689974674477386087
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCC----CCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 2364543206874003330666412662058755----56546622201212101223323334443023522012116
Q gi|254780859|r 163 RCVRFITEVAGVSELGLVGRGENAEITTYLEQSL----TSEMQGNIIDLCPVGALTSKPFAFTGRSWELTKTDSIDVMD 237 (700)
Q Consensus 163 RCVR~c~Ev~g~~~lg~~~RG~~~~i~~~~~~~~----~~e~~Gncvd~CPvGALt~k~~~~~~Rpwel~~~~SvC~~C 237 (700)
T Consensus 153 RCVr~C~evqg~~ai~~~~RG~~~~I~~~~~~~~~~s~~C~~CG~Cv~vCPvGAL~eK~----~~~we~~~~~~~~~~~ 227 (236)
T PRK07569 153 RCVRVCDEIEGAHTWDVAGRGVNSRVIADLNQPWGTSDACTSCGKCVQACPTGAIFRKG----ATVGEMEKDRDKLEFL 227 (236)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCC----CHHHHHHHCCCCEEEE
T ss_conf 79988875328736886147988888367788744445521256534219202265577----5377653178856899