HHsearch alignment for GI: 254780859 and conserved domain: PRK08222

>PRK08222 hydrogenase 4 subunit H; Validated.
Probab=98.72  E-value=1.8e-08  Score=80.14  Aligned_cols=87  Identities=17%  Similarity=0.245  Sum_probs=67.5

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHCCCCCHHHHHHHHCCCCCCEEEE---CCCCCCEEEECCCCCCC
Q ss_conf             799899838986747775677878885602100643290100236454320687400333---06664126620587555
Q gi|254780859|r  121 LQDQAIFFGFGSSRYSEEKRAVEDKSIGPLVKTVMNRCIHCTRCVRFITEVAGVSELGLV---GRGENAEITTYLEQSLT  197 (700)
Q Consensus       121 LQd~~~~~g~~~~r~~~~k~~~~~~~~~p~i~~d~~rCI~C~RCVR~c~Ev~g~~~lg~~---~RG~~~~i~~~~~~~~~  197 (700)
T Consensus         4 llk~~lk~G~~T~~YP~e~~~~~~~fRG-~p~~d~ekCIgC~~C~~~CP~----~AI~~~~d~~~~~r----~~~id~gr   74 (181)
T PRK08222          4 LLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPA----NALTIQTDDQQNSR----TWQLYLGR   74 (181)
T ss_pred             HHHHHHCCCCHHHCCCCCCCCCCCCCCC-EEECCHHHCCCHHHHHHHCCC----CCCEEEECCCCCCE----EEEECCCC
T ss_conf             9999963898020399999999999677-331681018453289875860----26687622678856----88852661


Q ss_pred             CCCCCCEEECCCCCCCCCC
Q ss_conf             6546622201212101223
Q gi|254780859|r  198 SEMQGNIIDLCPVGALTSK  216 (700)
Q Consensus       198 ~e~~Gncvd~CPvGALt~k  216 (700)
T Consensus        75 CIfCG~C~EvCPt~AI~lt   93 (181)
T PRK08222         75 CIYCGRCEEVCPTRAIQLT   93 (181)
T ss_pred             CCCCCHHHHHCCCCCCCCC
T ss_conf             6787724414881420677