HHsearch alignment for GI: 254780859 and conserved domain: PRK10882
>PRK10882 hydrogenase 2 protein HybA; Provisional.
Probab=97.66 E-value=2.6e-05 Score=57.42 Aligned_cols=150 Identities=15% Similarity=0.076 Sum_probs=79.5
Q ss_pred HCCCHHHCCCCCHHHHHHHHCCCCCCEEEECC---------CC-CCEEEECC-------C--------CCCCCCCCC--C
Q ss_conf 10064329010023645432068740033306---------66-41266205-------8--------755565466--2
Q gi|254780859|r 151 VKTVMNRCIHCTRCVRFITEVAGVSELGLVGR---------GE-NAEITTYL-------E--------QSLTSEMQG--N 203 (700)
Q Consensus 151 i~~d~~rCI~C~RCVR~c~Ev~g~~~lg~~~R---------G~-~~~i~~~~-------~--------~~~~~e~~G--n 203 (700)
T Consensus 41 mLiD~TkCiGCraCvvACke~N~~~~~p~~~~~~~~p~dLs~~t~~vI~~~~~~~~~~~~~~~~~~~fv~~~C~HC~~P~ 120 (329)
T PRK10882 41 MLYDSTLCVGCQACVTKCQEINFPERNPDGEQTWDNPDKLSPYTNNIIKVWKSGTGVNKDQEENGYAYIKKQCMHCVDPN 120 (329)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCH
T ss_conf 99888907581899999999757888886666444665578862257888733654346677765146676797989986
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEECC-CCCCCCCHHHHC
Q ss_conf 2201212101223323334443023522012116886436675159999885247888777741135-542210000000
Q gi|254780859|r 204 IIDLCPVGALTSKPFAFTGRSWELTKTDSIDVMDALGSAIRIDARGCEVMRILPRINESINEEWISD-KTRFIWDGLKVQ 282 (700)
Q Consensus 204 cvd~CPvGALt~k~~~~~~Rpwel~~~~SvC~~C~~GC~i~v~v~~g~i~rv~~~~~~~vN~g~lC~-KGRf~~d~~~~d 282 (700)
T Consensus 121 C~~~CP~gA~~k~~~-~G~V~~d-~~~CiGC~~C~~aCP~~iP~~~~------~~~~~~i~KC~~C~~~~---~-----d 184 (329)
T PRK10882 121 CVSVCPVSALTKDPK-TGIVHYD-KDVCTGCRYCMVACPFNVPKYDY------NNPFGAIHKCELCNQKG---V-----E 184 (329)
T ss_pred HHHHCCCCCEEECCC-CCEEEEC-CCEECCCCHHHHCCCCCCCCCCC------CCCCCCEEECCCCCCCC---H-----H
T ss_conf 674099775587689-9549971-57007710675439999974235------57898641388987853---2-----5
Q ss_pred CCCHHHEEC------CCCEEECCHHHHHHHHHHHHCCCCC
Q ss_conf 011011002------2220232414566888752013445
Q gi|254780859|r 283 RLDCPYARI------NGRLKPVSWDYALKAIKSAVLSSDV 316 (700)
Q Consensus 283 RL~~PliR~------~g~~~~iSWdeAl~~ia~~L~~~~~ 316 (700)
T Consensus 185 Ri~~G~~PACv~aCPtgAl~FG~R~ell~~A~~Ri~~~p~ 224 (329)
T PRK10882 185 RLDKGGLPGCVEVCPTGAVIFGTREELLAEAKRRLALKPG 224 (329)
T ss_pred HHHCCCCCCCHHHCCCCCCEECCHHHHHHHHHHHHHHCCC
T ss_conf 8878998704513742334325899999999999984899