HHsearch alignment for GI: 254780859 and conserved domain: PRK12575
>PRK12575 succinate dehydrogenase iron-sulfur subunit; Provisional.
Probab=97.87 E-value=3.7e-06 Score=63.51 Aligned_cols=162 Identities=19% Similarity=0.242 Sum_probs=79.5
Q ss_pred EEEEEC---CCCCHHHHHHHCCCCCCCCCCCCCCCCCCEE-----EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 999968---8875889999868954612127999645600-----04799971798870200265664566376668537
Q gi|254780859|r 12 IEIEVP---SGFTILQACELAGAEIPRFCFHERLSIAGNC-----RMCLVEIKGIASKPQASCAMNVSDLRAGPNGELPE 83 (700)
Q Consensus 12 ~~v~v~---~g~til~a~~~~gi~IP~~Cy~~~l~~~g~C-----RmClVeve~~~~k~~~sC~t~v~~gm~~~~~~g~~ 83 (700)
T Consensus 23 ~~y~v~~~~~~~tvLd~L~~ik~~------D~tLaFr~sCR~gICGSCam~ING-~~~L--AC~t~v~~~~-----~~i~ 88 (235)
T PRK12575 23 QRYELAPRAEDRMLLDVLGRVKAQ------DETLSYRRSCREGVCGSDAMNING-RNGL--ACVTSMQALP-----REIV 88 (235)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHC------CCCEEEECCCCCCCCCCCEEEECC-CCCC--CEEEEHHHCC-----CCEE
T ss_conf 899958688987199999999824------998366457889978778758899-8665--4787866657-----8559
Q ss_pred EEECCHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCCCCCCCC--CCCH--HCC-CH
Q ss_conf 9819989999999999999827899-887788878883799899838986--74777567787888--5602--100-64
Q gi|254780859|r 84 VFTKSSMVKKARAGVMEFLLINHPL-DCPICDQGGECDLQDQAIFFGFGS--SRYSEEKRAVEDKS--IGPL--VKT-VM 155 (700)
Q Consensus 84 v~t~s~~v~~~r~~vle~ll~nHpl-dCp~Cd~~GeC~LQd~~~~~g~~~--~r~~~~k~~~~~~~--~~p~--i~~-d~ 155 (700)
T Consensus 89 ---------------IeP-l~~fpVIkDLVV---------D~~~~~~~~~~v~p~~~~~~~~~~~e~~~~p~~~~~~~~~ 143 (235)
T PRK12575 89 ---------------LRP-LPGLPVVRDLIV---------DMTSFFNQYHSVRPYLVNEGVPPERERLQTPQEREQLDGL 143 (235)
T ss_pred ---------------EEE-CCCCCCCCCCEE---------CCHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf ---------------998-999962223266---------0399998755224386148998851233798899988728
Q ss_pred HHCCCCCHHHHHHHHCC-------CCCCEEEECC------CC--C--CEEEECCCCCCCCCCCCCEEECCCCCC
Q ss_conf 32901002364543206-------8740033306------66--4--126620587555654662220121210
Q gi|254780859|r 156 NRCIHCTRCVRFITEVA-------GVSELGLVGR------GE--N--AEITTYLEQSLTSEMQGNIIDLCPVGA 212 (700)
Q Consensus 156 ~rCI~C~RCVR~c~Ev~-------g~~~lg~~~R------G~--~--~~i~~~~~~~~~~e~~Gncvd~CPvGA 212 (700)
T Consensus 144 ~~CI~Cg~C~saCp~~~~~~~~f~GP~al~~a~r~~~D~RD~~~~erl~~l~~~~g~~~C~~~~~C~~vCPK~I 217 (235)
T PRK12575 144 YECILCACCSSACPSYWWNPDKFVGPAGLLQAYRFIVDSRDDASAARLDDLEDPYRLFRCRTIMNCVDVCPKGL 217 (235)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
T ss_conf 87550333886646610085356086888877662158631459999998417898508988588246287899