HHsearch alignment for GI: 254780859 and conserved domain: PRK12576
>PRK12576 succinate dehydrogenase iron-sulfur subunit; Provisional.
Probab=97.96 E-value=2.8e-06 Score=64.38 Aligned_cols=170 Identities=21% Similarity=0.320 Sum_probs=87.1
Q ss_pred ECCEEEEECCCCCHHHHHHHCCC-CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEE
Q ss_conf 99999996888758899998689-54612127999645600047999717988702002656645663766685-37981
Q gi|254780859|r 9 VDGIEIEVPSGFTILQACELAGA-EIPRFCFHERLSIAGNCRMCLVEIKGIASKPQASCAMNVSDLRAGPNGEL-PEVFT 86 (700)
Q Consensus 9 Idg~~v~v~~g~til~a~~~~gi-~IP~~Cy~~~l~~~g~CRmClVeve~~~~k~~~sC~t~v~~gm~~~~~~g-~~v~t 86 (700)
T Consensus 20 ~~~y~v~~~~~~tvLd~L~~IK~~~D~sL~fR~sC-r~giCGSCam~ING-~~~L--AC~t~v~d~~~--~~~~~I~Ie- 92 (311)
T PRK12576 20 WQEYEVEVDRGTQVTEALRRIKEEQDPTLAYRASC-HMAVCGSCGMKING-EPRL--ACKTLVLDVAK--EGNNVVTVE- 92 (311)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCC-CCCCCCCCEEEECC-CCCC--CEEEEHHHHHH--CCCCCEEEE-
T ss_conf 57999967999979999999996149972674478-88888757577899-3342--12205555410--569968998-
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHH-HHHHHHHCCCC--CCCCCCCCCC--CCC--CCC--CHHCC-CH
Q ss_conf 99899999999999998278998-877888788837-99899838986--7477756778--788--856--02100-64
Q gi|254780859|r 87 KSSMVKKARAGVMEFLLINHPLD-CPICDQGGECDL-QDQAIFFGFGS--SRYSEEKRAV--EDK--SIG--PLVKT-VM 155 (700)
Q Consensus 87 ~s~~v~~~r~~vle~ll~nHpld-Cp~Cd~~GeC~L-Qd~~~~~g~~~--~r~~~~k~~~--~~~--~~~--p~i~~-d~ 155 (700)
T Consensus 93 --------------------PL~~~pV-----ikDLvVD~~~f~~k~~~vkPwl~~~~~~~~~~~e~~qspee~~~l~~~ 147 (311)
T PRK12576 93 --------------------PLDNFKV-----VRDLIVDFDEFYERMRKVKPRLYPREEVLEGKGEYRLLPEDQMELWKF 147 (311)
T ss_pred --------------------ECCCCCC-----CCCCEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf --------------------6899973-----222511369999998732762505888889864204799999988605
Q ss_pred HHCCCCCHHHHHHHHCCCCCCEEEEC--------------C--CCCCEEEECCCCCCCCCCCCCEEECCCCCC
Q ss_conf 32901002364543206874003330--------------6--664126620587555654662220121210
Q gi|254780859|r 156 NRCIHCTRCVRFITEVAGVSELGLVG--------------R--GENAEITTYLEQSLTSEMQGNIIDLCPVGA 212 (700)
Q Consensus 156 ~rCI~C~RCVR~c~Ev~g~~~lg~~~--------------R--G~~~~i~~~~~~~~~~e~~Gncvd~CPvGA 212 (700)
T Consensus 148 ~~CIlCg~C~s~Cp~~~~n~~--ylGPaal~ka~R~~~DsRD~~~~eRl~~~~~Gvw~C~~c~~C~~vCPK~i 218 (311)
T PRK12576 148 AQCIWCGLCVSACPVVAIDEE--FLGPAALAKGYRFLADPRDTITEERIKILIDSAWRCTFCYSCSNVCPKDV 218 (311)
T ss_pred HHCHHHHHHHHCCCCCCCCCC--CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCC
T ss_conf 434225078601899687988--65889999999874688765189999998548716621643675588999