HHsearch alignment for GI: 254780859 and conserved domain: PRK13532
>PRK13532 nitrate reductase; Provisional.
Probab=100.00 E-value=0 Score=565.13 Aligned_cols=386 Identities=20% Similarity=0.197 Sum_probs=302.3
Q ss_pred EEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCHH-HHCCCCHHHEEC-------CCCEEEC
Q ss_conf 23522012116886436675159999885247888777741135542210000-000011011002-------2220232
Q gi|254780859|r 227 LTKTDSIDVMDALGSAIRIDARGCEVMRILPRINESINEEWISDKTRFIWDGL-KVQRLDCPYARI-------NGRLKPV 298 (700)
Q Consensus 227 l~~~~SvC~~C~~GC~i~v~v~~g~i~rv~~~~~~~vN~g~lC~KGRf~~d~~-~~dRL~~PliR~-------~g~~~~i 298 (700)
T Consensus 39 ~~~~~t~C~~C~~gCgl~~~v~dG~vv~v~gd~~~p~n~G~lC~KG~~~~~~~y~pdRl~~Pl~R~~~g~~r~~G~f~~i 118 (828)
T PRK13532 39 IKWDKAPCRFCGTGCGVLVGTKDGRVVATQGDPDAPVNRGLNCIKGYFLSKIMYGKDRLTQPLLRMKDGKYDKEGEFTPV 118 (828)
T ss_pred CEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCEECHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEE
T ss_conf 45997689997278986999989999998768999988831885122036765798612688678989986889858994
Q ss_pred CHHHHHHHHHHHHCCCCCCEE-----EEECCCCCCHHHHHHHHHHH-HCCCCCEECCCCCCCCCHHHHCC----CCCCCC
Q ss_conf 414566888752013445314-----78504323235554788986-36877242023344466434012----546778
Q gi|254780859|r 299 SWDYALKAIKSAVLSSDVKLG-----AVVGDLSSVEEIYALKLLMQ-SLGCENFDCRQNGEYLDPSYGRA----SYIFNP 368 (700)
Q Consensus 299 SWdeAl~~ia~~L~~~~~~~g-----~~~g~~~t~Ee~y~~k~l~~-~lGt~nid~~~~~~~~~~~~~~~----~~~~~~ 368 (700)
T Consensus 119 SWdEAld~iA~klk~i~~~~G~~aia~~gsg~~~~~~~y~~~k~~~~~~gt~n~d~~~~~c~~~~~~~~~~~fG~~~~~~ 198 (828)
T PRK13532 119 SWDQAFDVMAEKFKKALKEKGPTAVGMFGSGQWTIWEGYAASKLMKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMG 198 (828)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 39999999999999999986988699970787634778999999974047886587611316899999998708899987
Q ss_pred CHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH--HHCCCCEEECCCCCHH---HHHHHHCCCC-----------------
Q ss_conf 78774018579997385322573102577899--9759970661685012---2334430489-----------------
Q gi|254780859|r 369 TIQGIEEADAMLIIGSNPRLEAAVLNARIRKR--WRRGNFPIAVIGDVGE---LRYKYEHLGN----------------- 426 (700)
Q Consensus 369 ~i~die~ad~illiG~Np~~~~Pvl~~rirka--~~~g~~~I~vi~~~~~---l~~~~~~l~~----------------- 426 (700)
T Consensus 199 ~~~D~~~ad~iv~~G~N~ae~hp~~~~ri~~~~~~~~g~k~ividp~~t~ta~~AD~~l~irPGTD~Al~~am~~~ii~~ 278 (828)
T PRK13532 199 CYDDIEAADAFVLWGSNMAEMHPILWSRITDRRLSNPHVKVAVLSTFEHRSFELADNGIIFTPQTDLAILNYIANYIIQN 278 (828)
T ss_pred CHHHHHHCCEEEEECCCHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 77679869999998788578577899999999975599989993698884056641124568996699999999999977
Q ss_pred ----------------------------------------------CHHHHHHHHCCCCH----------------HHHH
Q ss_conf ----------------------------------------------86788888268778----------------8999
Q gi|254780859|r 427 ----------------------------------------------GSEALADLVSGQHP----------------FFKK 444 (700)
Q Consensus 427 ----------------------------------------------~~e~l~~~~~g~~~----------------~~~~ 444 (700)
T Consensus 279 ~l~D~~Fv~~~T~~~~g~~d~Gy~~~~~~~~~~~~~~~~~~~~~~~~fe~l~~~v~~ytpe~aa~itGvp~e~I~~~A~~ 358 (828)
T PRK13532 279 NAVNWDFVNKHTNFRKGATDIGYGLRPTHPLEKKAKNPGAGASTPISFEEFKKFVAEYTLEKTAKMSGVPKEQLEQLAKL 358 (828)
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 88469999987332334432344445431234332023444556778999999876189999999879499999999999
Q ss_pred HHHCCCCHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CHHCCCCC----C---------
Q ss_conf 872353102-35443321047469898989998874105853347542467531045-21017765----8---------
Q gi|254780859|r 445 LQEATRPLI-IVGQGALRASDNVEVMANIAKLVIDVGGISDSWNGFAVLHTVASRVG-ALDLGFVP----A--------- 509 (700)
Q Consensus 445 l~~a~~~~i-i~G~g~~~~~~g~~~~~al~~l~~~~G~ig~~g~G~~~L~~~~n~~G-a~d~g~~P----~--------- 509 (700)
T Consensus 359 ~a~~~~~~~~~~~~G~~q~~~G~~~~~a~~~L~~ltGnig~pG~g~~~l~G~~n~~G~~~~~G~~~~~lP~~~~~~~p~~ 438 (828)
T PRK13532 359 YADPNRKVVSFWTMGFNQHTRGVWANNLVYNIHLLTGKISTPGNGPFSLTGQPSACGTAREVGTFSHRLPADMVVTNPKH 438 (828)
T ss_pred HHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHH
T ss_conf 84568740023567877221779999999999987366676888654445674677744320557667987544688899
Q ss_pred -----------------CCCCCHHHHH-----HCCCEEEECCCCHHHCC------------CCCCEEEHHHHHHHHHHHH
Q ss_conf -----------------6523688886-----01675998076422016------------6543450221166668874
Q gi|254780859|r 510 -----------------DDTINAMNIL-----DKTDIVFLLGADELDFS------------DKQALTVYIGSHGDRGAQS 555 (700)
Q Consensus 510 -----------------~~~~~~~~~~-----~~~~~l~~~g~d~l~~~------------~~~~fvV~~d~~~t~tA~~ 555 (700)
T Consensus 439 ~~~~~~~w~~p~~~~~~~~g~~~~~~~~~~~~g~ik~~~v~~~Np~~~~pn~~~~~~~~~~~~~~flVv~D~f~t~Ta~~ 518 (828)
T PRK13532 439 REIAEKIWKLPEGTIPPKPGYHAVLQDRMLKDGKLNAYWVMCNNNMQAGPNINEERLPGWRNPDNFIVVSDPYPTVSALA 518 (828)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHH
T ss_conf 99999870798243689888238888877655873499995467131387541999999868998799972688853544
Q ss_pred CCEEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 557704786202472088208867420443288555740799999999980779968
Q gi|254780859|r 556 ADVILPGAAYTEKSGLWVNTEGRVQMGMRAIFPPGDAKEDWEIICALADELKCSLPF 612 (700)
Q Consensus 556 ADVVLP~a~~~Ek~Gtf~N~EgRvQ~~~~av~p~geak~dw~Il~~La~~LG~~~~~ 612 (700)
T Consensus 519 ADvVLPaat~~Ek~g~~~n~~r~~q~~~k~v~ppgEak~D~~i~~elakr~~~~~~~ 575 (828)
T PRK13532 519 ADLILPTAMWVEKEGAYGNAERRTQFWRQQVKAPGEAKSDLWQLVEFSKRFKTEEVW 575 (828)
T ss_pred CCEEECCCCCCCCCCCEECCCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 778855774020266343476503420110278256666699999999871742025