HHsearch alignment for GI: 254780859 and conserved domain: PTZ00038
>PTZ00038 ferredoxin; Provisional.
Probab=97.72 E-value=4.9e-05 Score=55.40 Aligned_cols=65 Identities=26% Similarity=0.352 Sum_probs=49.8
Q ss_pred CEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEE-CC---------------CCCCCCCCCCCCCCCCC
Q ss_conf 999996888758899998689546121279996456000479997-17---------------98870200265664566
Q gi|254780859|r 11 GIEIEVPSGFTILQACELAGAEIPRFCFHERLSIAGNCRMCLVEI-KG---------------IASKPQASCAMNVSDLR 74 (700)
Q Consensus 11 g~~v~v~~g~til~a~~~~gi~IP~~Cy~~~l~~~g~CRmClVev-e~---------------~~~k~~~sC~t~v~~gm 74 (700)
T Consensus 87 ~~~ieC~eDE~ILDAAer~GI~LPySCR------~G~CgTCkakLisGeVd~sd~~~L~deE~a~GyvLtC~A~P~SD~v 160 (172)
T PTZ00038 87 EKVIECDEDEYILEAAERQGVELPYSCR------GGSCSTCAAKLVEGEVDNEDQSYLDDEQLKKGYCLLCTCYAKSDCT 160 (172)
T ss_pred CEEEECCCCCHHHHHHHHCCCCCCCCCC------CCCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCEEEECCEECCCEE
T ss_conf 7768689986599999984998777777------8618888179998148536367899899968928988388987779
Q ss_pred CCCCCCCCEEEECCHH
Q ss_conf 3766685379819989
Q gi|254780859|r 75 AGPNGELPEVFTKSSM 90 (700)
Q Consensus 75 ~~~~~~g~~v~t~s~~ 90 (700)
T Consensus 161 ---------IET~~Ed 167 (172)
T PTZ00038 161 ---------IETHKED 167 (172)
T ss_pred ---------EEECCHH
T ss_conf ---------9926536