HHsearch alignment for GI: 254780859 and conserved domain: TIGR01971
>TIGR01971 NuoI NADH-quinone oxidoreductase, chain I; InterPro: IPR010226 This entry represents the I subunit (one of 14 subunits, A to N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This family does not contain 'I' subunits from the closely related F420H2 dehydrogenase and formate hydrogenlyase complexes.; GO: 0016651 oxidoreductase activity acting on NADH or NADPH, 0006118 electron transport.
Probab=98.07 E-value=1.1e-06 Score=67.37 Aligned_cols=79 Identities=23% Similarity=0.408 Sum_probs=53.9
Q ss_pred CCCCCCCCCC-CCCCCCHHCCCH----HHCCCCCHHHHHHHHCCCCCCEEEECCCCCC----E-----EEECCCCCCCCC
Q ss_conf 4777567787-888560210064----3290100236454320687400333066641----2-----662058755565
Q gi|254780859|r 134 RYSEEKRAVE-DKSIGPLVKTVM----NRCIHCTRCVRFITEVAGVSELGLVGRGENA----E-----ITTYLEQSLTSE 199 (700)
Q Consensus 134 r~~~~k~~~~-~~~~~p~i~~d~----~rCI~C~RCVR~c~Ev~g~~~lg~~~RG~~~----~-----i~~~~~~~~~~e 199 (700)
T Consensus 18 ~YP~e~~~LpypRfRG-~i~L~r~pG~e~CiaC~LC~~~CP~----~~I~~~~~~~~~enPv~~g~r~~~~y~In~grCi 92 (129)
T TIGR01971 18 QYPEEKLYLPYPRFRG-RIVLTRDPGEEKCIACELCARVCPA----DAIRVVTEERETENPVEDGKRRLKFYQINFGRCI 92 (129)
T ss_pred CCCCCCCCCCCCCCCE-EEEEEECCCCCEEECCCCEEECCCC----CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 7886776678897542-5876536997135643010000754----4415652038888873236523789621321222
Q ss_pred CCCCEEECCCCCCCCCCC
Q ss_conf 466222012121012233
Q gi|254780859|r 200 MQGNIIDLCPVGALTSKP 217 (700)
Q Consensus 200 ~~Gncvd~CPvGALt~k~ 217 (700)
T Consensus 93 fCGlC~E~CP~~AI~lt~ 110 (129)
T TIGR01971 93 FCGLCEEACPTDAIVLTP 110 (129)
T ss_pred EEECCCCCCCCHHHHCCC
T ss_conf 330751127101543373