HHsearch alignment for GI: 254780859 and conserved domain: TIGR03129
>TIGR03129 one_C_dehyd_B formylmethanofuran dehydrogenase subunit B. Members of this largely archaeal protein family are subunit B of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit C. Note that this model does not distinguish tungsten (FwdB) from molybdenum-containing (FmdB) forms of this enzyme.
Probab=100.00 E-value=0 Score=492.65 Aligned_cols=360 Identities=17% Similarity=0.158 Sum_probs=284.7
Q ss_pred EECCCCCCCCC-EEEEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCHHH-HCCCCHHHEECCCCEEECCHHHHHHHHH
Q ss_conf 20121168864-366751599998852478887777411355422100000-0001101100222202324145668887
Q gi|254780859|r 231 DSIDVMDALGS-AIRIDARGCEVMRILPRINESINEEWISDKTRFIWDGLK-VQRLDCPYARINGRLKPVSWDYALKAIK 308 (700)
Q Consensus 231 ~SvC~~C~~GC-~i~v~v~~g~i~rv~~~~~~~vN~g~lC~KGRf~~d~~~-~dRL~~PliR~~g~~~~iSWdeAl~~ia 308 (700)
T Consensus 1 d~vC~~C~~gC~~l~v~v~~~~i~~v~~----------lC~KG~~~~~~~~~~dRl~~PL~R~~g~~~~iSWdeAl~~ia 70 (421)
T TIGR03129 1 NVVCPFCGCLCDDIEVEVEGNKIVKVEN----------ACRIGAAKFKEAEESHRITRPMIRKNGDGKEVSYEEAIEKAA 70 (421)
T ss_pred CCCCCCCCCCCCCEEEEEECCEEEECCC----------CCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHH
T ss_conf 9788845168478799998999965277----------885356558752696322698064599736817999999999
Q ss_pred HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHH-CCCCCCCCCHHHHHC-CCEEEEECCCC
Q ss_conf 5201344531478504323235554788986368772420233444664340-125467787877401-85799973853
Q gi|254780859|r 309 SAVLSSDVKLGAVVGDLSSVEEIYALKLLMQSLGCENFDCRQNGEYLDPSYG-RASYIFNPTIQGIEE-ADAMLIIGSNP 386 (700)
Q Consensus 309 ~~L~~~~~~~g~~~g~~~t~Ee~y~~k~l~~~lGt~nid~~~~~~~~~~~~~-~~~~~~~~~i~die~-ad~illiG~Np 386 (700)
T Consensus 71 ~~L~~~~~~-~~~g~~~~~~e~~~~~~~la~~~~~-~~d~~~~~c~~~~~~a~~~~g~~~~t~~~~~~~ad~il~~G~Np 148 (421)
T TIGR03129 71 EILKNAKRP-LIYGWSSTSCEAQRAGLELAEKLGA-VIDNTASVCHGPSLLALQEVGWPSCTLGEVKNRADVIIYWGTNP 148 (421)
T ss_pred HHHHHCCCC-EEEEECCCCHHHHHHHHHHHHHHCC-CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCH
T ss_conf 999861787-6999666417899999999999588-41477540368999999856987667455650477899978885
Q ss_pred CCCCCCHHHH--------HHHHHHCCCCEEECCCCCHHHHH---HHHCCCCCHH-----HHHHHHCCCC-----------
Q ss_conf 2257310257--------78999759970661685012233---4430489867-----8888826877-----------
Q gi|254780859|r 387 RLEAAVLNAR--------IRKRWRRGNFPIAVIGDVGELRY---KYEHLGNGSE-----ALADLVSGQH----------- 439 (700)
Q Consensus 387 ~~~~Pvl~~r--------irka~~~g~~~I~vi~~~~~l~~---~~~~l~~~~e-----~l~~~~~g~~----------- 439 (700)
T Consensus 149 ~~s~P~~~~r~~~~~~~~~~~~~~~~~kliviDpr~t~ta~~Ad~~l~i~PGtD~al~~al~~~i~g~~~~~e~itGv~~ 228 (421)
T TIGR03129 149 MHAHPRHMSRYSVFPRGFFTQRGREDRTVIVVDPRKTDTAKLADYHLQIKPGSDYELISALRAVLRGKEPQPEEVAGIPK 228 (421)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCH
T ss_conf 89685788777887889999645359879998475780556308666018998799999999997679864076609999
Q ss_pred ----HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCC----CCC-
Q ss_conf ----88999872353102354433210474698989899988741058533475424675310452101776----586-
Q gi|254780859|r 440 ----PFFKKLQEATRPLIIVGQGALRASDNVEVMANIAKLVIDVGGISDSWNGFAVLHTVASRVGALDLGFV----PAD- 510 (700)
Q Consensus 440 ----~~~~~l~~a~~~~ii~G~g~~~~~~g~~~~~al~~l~~~~G~ig~~g~G~~~L~~~~n~~Ga~d~g~~----P~~- 510 (700)
T Consensus 229 e~i~~lA~~~a~a~~~~i~~g~g~~~~~~~~~~~~a~~~l~~~l~~~~~~--~~~~l~g~~n~~G~~~~~~~~~g~p~~~ 306 (421)
T TIGR03129 229 EKILELAEILKNAKFGVIFFGLGLTSSLGKHRNVEIAIELVKDLNKYTKF--TIIPMRGHYNVAGFNQVLTWETGYPFGV 306 (421)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC--CEECCCCCCCCCCCHHCCCCCCCCCCCC
T ss_conf 99999999997489669999687132215999999999999986700455--6403778688666000143456886665
Q ss_pred ----------C-CCCHHHHH--HCCCEEEECCCCHHHCCC-------CCCEEEHHHHHHHHHHHHCCEEECCCCCC-CCC
Q ss_conf ----------5-23688886--016759980764220166-------54345022116666887455770478620-247
Q gi|254780859|r 511 ----------D-TINAMNIL--DKTDIVFLLGADELDFSD-------KQALTVYIGSHGDRGAQSADVILPGAAYT-EKS 569 (700)
Q Consensus 511 ----------~-~~~~~~~~--~~~~~l~~~g~d~l~~~~-------~~~fvV~~d~~~t~tA~~ADVVLP~a~~~-Ek~ 569 (700)
T Consensus 307 ~~~~~~~~~~p~~~~~~~~l~~g~ikal~v~g~NP~~s~P~~~~~~l~~~~~Vv~D~f~TeTa~~ADvVLPaat~~~Ek~ 386 (421)
T TIGR03129 307 DFSRGYPRYNPGETTTVDLLKRKEVDAALIIGSDPGAHFPQDAVKHLAEIPVIVIDPHPTPTTEIADVVIPVAIDGIEAG 386 (421)
T ss_pred CHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHCHHHHHHHHCCCCEEEECCCCCHHHHHCCEEECCCCCCCCCC
T ss_conf 34226864586331599997579988899978872033889999874799989975889810403799954798774488
Q ss_pred CEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 2088208867420443288555740799999999980
Q gi|254780859|r 570 GLWVNTEGRVQMGMRAIFPPGDAKEDWEIICALADEL 606 (700)
Q Consensus 570 Gtf~N~EgRvQ~~~~av~p~geak~dw~Il~~La~~L 606 (700)
T Consensus 387 Gt~~n~e~r~~~~~~~~~p~--~~sd~~i~~~ia~r~ 421 (421)
T TIGR03129 387 GTAYRMDNVPIRLRKVIESP--EPSDEEILKKILERV 421 (421)
T ss_pred CEEECCCCCEEEEECCCCCC--CCCHHHHHHHHHHCC
T ss_conf 17991798477023377939--879999999998209