HHsearch alignment for GI: 254780859 and conserved domain: TIGR03129

>TIGR03129 one_C_dehyd_B formylmethanofuran dehydrogenase subunit B. Members of this largely archaeal protein family are subunit B of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit C. Note that this model does not distinguish tungsten (FwdB) from molybdenum-containing (FmdB) forms of this enzyme.
Probab=100.00  E-value=0  Score=492.65  Aligned_cols=360  Identities=17%  Similarity=0.158  Sum_probs=284.7

Q ss_pred             EECCCCCCCCC-EEEEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCHHH-HCCCCHHHEECCCCEEECCHHHHHHHHH
Q ss_conf             20121168864-366751599998852478887777411355422100000-0001101100222202324145668887
Q gi|254780859|r  231 DSIDVMDALGS-AIRIDARGCEVMRILPRINESINEEWISDKTRFIWDGLK-VQRLDCPYARINGRLKPVSWDYALKAIK  308 (700)
Q Consensus       231 ~SvC~~C~~GC-~i~v~v~~g~i~rv~~~~~~~vN~g~lC~KGRf~~d~~~-~dRL~~PliR~~g~~~~iSWdeAl~~ia  308 (700)
T Consensus         1 d~vC~~C~~gC~~l~v~v~~~~i~~v~~----------lC~KG~~~~~~~~~~dRl~~PL~R~~g~~~~iSWdeAl~~ia   70 (421)
T TIGR03129         1 NVVCPFCGCLCDDIEVEVEGNKIVKVEN----------ACRIGAAKFKEAEESHRITRPMIRKNGDGKEVSYEEAIEKAA   70 (421)
T ss_pred             CCCCCCCCCCCCCEEEEEECCEEEECCC----------CCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHH
T ss_conf             9788845168478799998999965277----------885356558752696322698064599736817999999999


Q ss_pred             HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHH-CCCCCCCCCHHHHHC-CCEEEEECCCC
Q ss_conf             5201344531478504323235554788986368772420233444664340-125467787877401-85799973853
Q gi|254780859|r  309 SAVLSSDVKLGAVVGDLSSVEEIYALKLLMQSLGCENFDCRQNGEYLDPSYG-RASYIFNPTIQGIEE-ADAMLIIGSNP  386 (700)
Q Consensus       309 ~~L~~~~~~~g~~~g~~~t~Ee~y~~k~l~~~lGt~nid~~~~~~~~~~~~~-~~~~~~~~~i~die~-ad~illiG~Np  386 (700)
T Consensus        71 ~~L~~~~~~-~~~g~~~~~~e~~~~~~~la~~~~~-~~d~~~~~c~~~~~~a~~~~g~~~~t~~~~~~~ad~il~~G~Np  148 (421)
T TIGR03129        71 EILKNAKRP-LIYGWSSTSCEAQRAGLELAEKLGA-VIDNTASVCHGPSLLALQEVGWPSCTLGEVKNRADVIIYWGTNP  148 (421)
T ss_pred             HHHHHCCCC-EEEEECCCCHHHHHHHHHHHHHHCC-CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCH
T ss_conf             999861787-6999666417899999999999588-41477540368999999856987667455650477899978885


Q ss_pred             CCCCCCHHHH--------HHHHHHCCCCEEECCCCCHHHHH---HHHCCCCCHH-----HHHHHHCCCC-----------
Q ss_conf             2257310257--------78999759970661685012233---4430489867-----8888826877-----------
Q gi|254780859|r  387 RLEAAVLNAR--------IRKRWRRGNFPIAVIGDVGELRY---KYEHLGNGSE-----ALADLVSGQH-----------  439 (700)
Q Consensus       387 ~~~~Pvl~~r--------irka~~~g~~~I~vi~~~~~l~~---~~~~l~~~~e-----~l~~~~~g~~-----------  439 (700)
T Consensus       149 ~~s~P~~~~r~~~~~~~~~~~~~~~~~kliviDpr~t~ta~~Ad~~l~i~PGtD~al~~al~~~i~g~~~~~e~itGv~~  228 (421)
T TIGR03129       149 MHAHPRHMSRYSVFPRGFFTQRGREDRTVIVVDPRKTDTAKLADYHLQIKPGSDYELISALRAVLRGKEPQPEEVAGIPK  228 (421)
T ss_pred             HHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCH
T ss_conf             89685788777887889999645359879998475780556308666018998799999999997679864076609999


Q ss_pred             ----HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCC----CCC-
Q ss_conf             ----88999872353102354433210474698989899988741058533475424675310452101776----586-
Q gi|254780859|r  440 ----PFFKKLQEATRPLIIVGQGALRASDNVEVMANIAKLVIDVGGISDSWNGFAVLHTVASRVGALDLGFV----PAD-  510 (700)
Q Consensus       440 ----~~~~~l~~a~~~~ii~G~g~~~~~~g~~~~~al~~l~~~~G~ig~~g~G~~~L~~~~n~~Ga~d~g~~----P~~-  510 (700)
T Consensus       229 e~i~~lA~~~a~a~~~~i~~g~g~~~~~~~~~~~~a~~~l~~~l~~~~~~--~~~~l~g~~n~~G~~~~~~~~~g~p~~~  306 (421)
T TIGR03129       229 EKILELAEILKNAKFGVIFFGLGLTSSLGKHRNVEIAIELVKDLNKYTKF--TIIPMRGHYNVAGFNQVLTWETGYPFGV  306 (421)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC--CEECCCCCCCCCCCHHCCCCCCCCCCCC
T ss_conf             99999999997489669999687132215999999999999986700455--6403778688666000143456886665


Q ss_pred             ----------C-CCCHHHHH--HCCCEEEECCCCHHHCCC-------CCCEEEHHHHHHHHHHHHCCEEECCCCCC-CCC
Q ss_conf             ----------5-23688886--016759980764220166-------54345022116666887455770478620-247
Q gi|254780859|r  511 ----------D-TINAMNIL--DKTDIVFLLGADELDFSD-------KQALTVYIGSHGDRGAQSADVILPGAAYT-EKS  569 (700)
Q Consensus       511 ----------~-~~~~~~~~--~~~~~l~~~g~d~l~~~~-------~~~fvV~~d~~~t~tA~~ADVVLP~a~~~-Ek~  569 (700)
T Consensus       307 ~~~~~~~~~~p~~~~~~~~l~~g~ikal~v~g~NP~~s~P~~~~~~l~~~~~Vv~D~f~TeTa~~ADvVLPaat~~~Ek~  386 (421)
T TIGR03129       307 DFSRGYPRYNPGETTTVDLLKRKEVDAALIIGSDPGAHFPQDAVKHLAEIPVIVIDPHPTPTTEIADVVIPVAIDGIEAG  386 (421)
T ss_pred             CHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHCHHHHHHHHCCCCEEEECCCCCHHHHHCCEEECCCCCCCCCC
T ss_conf             34226864586331599997579988899978872033889999874799989975889810403799954798774488


Q ss_pred             CEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             2088208867420443288555740799999999980
Q gi|254780859|r  570 GLWVNTEGRVQMGMRAIFPPGDAKEDWEIICALADEL  606 (700)
Q Consensus       570 Gtf~N~EgRvQ~~~~av~p~geak~dw~Il~~La~~L  606 (700)
T Consensus       387 Gt~~n~e~r~~~~~~~~~p~--~~sd~~i~~~ia~r~  421 (421)
T TIGR03129       387 GTAYRMDNVPIRLRKVIESP--EPSDEEILKKILERV  421 (421)
T ss_pred             CEEECCCCCEEEEECCCCCC--CCCHHHHHHHHHHCC
T ss_conf             17991798477023377939--879999999998209