HHsearch alignment for GI: 254780859 and conserved domain: TIGR03149
>TIGR03149 cyt_nit_nrfC cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase.
Probab=95.23 E-value=0.011 Score=38.52 Aligned_cols=21 Identities=19% Similarity=0.543 Sum_probs=11.7
Q ss_pred HHCCCHHHCCCCCHHHHHHHH
Q ss_conf 210064329010023645432
Q gi|254780859|r 150 LVKTVMNRCIHCTRCVRFITE 170 (700)
Q Consensus 150 ~i~~d~~rCI~C~RCVR~c~E 170 (700)
T Consensus 119 iV~vd~~~CiGC~~C~~aCPy 139 (225)
T TIGR03149 119 IVDVHKDLCVGCQYCIAACPY 139 (225)
T ss_pred EEEEEHHHCCCHHHHHHCCCC
T ss_conf 799756869404189861999