HHsearch alignment for GI: 254780859 and conserved domain: TIGR03198
>TIGR03198 pucE xanthine dehydrogenase E subunit. This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.
Probab=97.60 E-value=0.0003 Score=49.66 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=73.3
Q ss_pred CCCEEEEECCEEEEE--CCCCCHHHHHHHC-CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 610499999999996--8887588999986-8954612127999645600047999717988702002656645663766
Q gi|254780859|r 2 QMMVKLKVDGIEIEV--PSGFTILQACELA-GAEIPRFCFHERLSIAGNCRMCLVEIKGIASKPQASCAMNVSDLRAGPN 78 (700)
Q Consensus 2 ~~mv~~~Idg~~v~v--~~g~til~a~~~~-gi~IP~~Cy~~~l~~~g~CRmClVeve~~~~k~~~sC~t~v~~gm~~~~ 78 (700)
T Consensus 1 k~~i~f~vNG~~~~~~~~~~~~Ll~~LR~~lgltgtK~G-----C~~G~CGACTVlvdG---~~v~SCl~~a~~------ 66 (151)
T TIGR03198 1 KEQFRFTVNGQAWEVAAVPTTRLSDLLRKELQLTGTKVS-----CGIGRCGACSVLIDG---KLANACLTMAYQ------ 66 (151)
T ss_pred CCEEEEEECCEEEEEECCCCCCHHHHHHHCCCCCCCCCC-----CCCCCCCCCEEEECC---CEEEEHHHHHHH------
T ss_conf 967999988999897379998899999730799667865-----188799961899899---398730633987------
Q ss_pred CCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 6853798199899999999999998278998877888788
Q gi|254780859|r 79 GELPEVFTKSSMVKKARAGVMEFLLINHPLDCPICDQGGE 118 (700)
Q Consensus 79 ~~g~~v~t~s~~v~~~r~~vle~ll~nHpldCp~Cd~~Ge 118 (700)
T Consensus 67 ~~G~~I~TvEGl~~~~l~~vq~af~~~~a~QCGyCtPG~v 106 (151)
T TIGR03198 67 ADGHEITTIEGIAENELDPCQTAFLEEGGFQCGYCTPGMV 106 (151)
T ss_pred HCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 3897899604456422429999999839983898738999