HHsearch alignment for GI: 254780859 and conserved domain: TIGR03287
>TIGR03287 methan_mark_16 putative methanogenesis marker 16 metalloprotein. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. This protein is a predicted to bind FeS clusters, based on the presence of two copies of the Fer4 domain (pfam00037), with each copy having four Cys residues invariant across all members.
Probab=90.68 E-value=0.057 Score=33.22 Aligned_cols=54 Identities=9% Similarity=-0.015 Sum_probs=28.6
Q ss_pred CCCCCCEEEEEECCCCCCCCCEEEEECCCC-EEEEEECCC-CC-CCCCCEECCCCCCC
Q ss_conf 344430235220121168864366751599-998852478-88-77774113554221
Q gi|254780859|r 221 TGRSWELTKTDSIDVMDALGSAIRIDARGC-EVMRILPRI-NE-SINEEWISDKTRFI 275 (700)
Q Consensus 221 ~~Rpwel~~~~SvC~~C~~GC~i~v~v~~g-~i~rv~~~~-~~-~vN~g~lC~KGRf~ 275 (700)
T Consensus 18 ~a~eVDVVTtGTfg~M~ssga~lnf~~~~P~~f~k~~~v~LNgVpay~G-pcpne~lg 74 (391)
T TIGR03287 18 TVEDVDVVTCATCGIMSGTYAVFSFPVSEPGSFRRAEEVYLNGIPAVVG-PCPNERLG 74 (391)
T ss_pred CCCCCCEEECCCCCCCCCCEEEEECCCCCCCHHCEEEEEEECCEECCCC-CCCCCCCE
T ss_conf 1140678946652444464178985779964100678898878213566-88632323