HHsearch alignment for GI: 254780859 and conserved domain: cd02769
>cd02769 MopB_DMSOR-BSOR-TMAOR The MopB_DMSOR-BSOR-TMAOR CD contains dimethylsulfoxide reductase (DMSOR), biotin sulfoxide reductase (BSOR), trimethylamine N-oxide reductase (TMAOR) and other related proteins. DMSOR always catalyzes the reduction of DMSO to dimethylsulfide, but its cellular location and oligomerization state are organism-dependent. For example, in Rhodobacter sphaeriodes and Rhodobacter capsulatus, it is an 82-kDa monomeric soluble protein found in the periplasmic space; in E. coli, it is membrane-bound and exists as a heterotrimer. BSOR catalyzes the reduction of biotin sulfixode to biotin, and is unique among Mo enzymes because no additional auxiliary proteins or cofactors are required. TMAOR is similar to DMSOR, but its only natural substrate is TMAO. Members of this CD belong to the molybdopterin_binding (MopB) superfamily of proteins.
Probab=100.00 E-value=0 Score=436.79 Aligned_cols=370 Identities=16% Similarity=0.211 Sum_probs=263.6
Q ss_pred CCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCHH-HHCCCCHHHEECC---------------CCEEECCHH
Q ss_conf 886436675159999885247888777741135542210000-0000110110022---------------220232414
Q gi|254780859|r 238 ALGSAIRIDARGCEVMRILPRINESINEEWISDKTRFIWDGL-KVQRLDCPYARIN---------------GRLKPVSWD 301 (700)
Q Consensus 238 ~~GC~i~v~v~~g~i~rv~~~~~~~vN~g~lC~KGRf~~d~~-~~dRL~~PliR~~---------------g~~~~iSWd 301 (700)
T Consensus 4 ~~~~~~~~~V~dGrvvkv~g~~~~p~~----~~~g~~~~~~vy~pdRl~~PmkR~G~~~~~~~~~~~~RG~g~f~rISWD 79 (609)
T cd02769 4 SHWGAFRARVKDGRIVGVRPFEEDPDP----SPLLDGVPDAVYSPTRIKYPMVRRGWLEKGPGSDRSLRGKEEFVRVSWD 79 (609)
T ss_pred CCCCCEEEEEECCEEEEEECCCCCCCC----HHHHHCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCHH
T ss_conf 523446999999999998768889985----0767141875149003368868622544566666566778987983599
Q ss_pred HHHHHHHHHHCCCCCCEEE--E-ECCC------CCCHHHHHHHHHHHHCCCC-----CEECCCCCCCCCHHHHCC--CCC
Q ss_conf 5668887520134453147--8-5043------2323555478898636877-----242023344466434012--546
Q gi|254780859|r 302 YALKAIKSAVLSSDVKLGA--V-VGDL------SSVEEIYALKLLMQSLGCE-----NFDCRQNGEYLDPSYGRA--SYI 365 (700)
Q Consensus 302 eAl~~ia~~L~~~~~~~g~--~-~g~~------~t~Ee~y~~k~l~~~lGt~-----nid~~~~~~~~~~~~~~~--~~~ 365 (700)
T Consensus 80 EAld~IA~kl~~i~~~~G~~sv~~~~~g~~~~g~~~~~~~~~~r~~~~~gg~~~~~~~~~~~a~~~~~~~~~G~~~~~~~ 159 (609)
T cd02769 80 EALDLVAAELKRVRKTYGNEAIFGGSYGWSSAGRFHHAQSLLHRFLNLAGGYVGSVGDYSTGAAQVILPHVVGSMEVYTE 159 (609)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999999999985985798515554436741578999999999738865889983567898763543614545588
Q ss_pred CCCCHHH-HHCCCEEEEECCCCCCCCCCH---------HHHHHHHHHCCCCEEECCCCCHHHHHHHH----CCCCCHH--
Q ss_conf 7787877-401857999738532257310---------25778999759970661685012233443----0489867--
Q gi|254780859|r 366 FNPTIQG-IEEADAMLIIGSNPRLEAAVL---------NARIRKRWRRGNFPIAVIGDVGELRYKYE----HLGNGSE-- 429 (700)
Q Consensus 366 ~~~~i~d-ie~ad~illiG~Np~~~~Pvl---------~~rirka~~~g~~~I~vi~~~~~l~~~~~----~l~~~~e-- 429 (700)
T Consensus 160 ~~~~~~~~~~na~~iv~wG~Np~~t~~~~~~~~~~h~~~~~l~~a~~~GaklIvVDPr~t~tA~~ad~~wlpirPGTD~A 239 (609)
T cd02769 160 QQTSWPVIAEHTELVVAFGADPLKNAQIAWGGIPDHQAYSYLKALKDRGIRFISISPLRDDTAAELGAEWIAIRPGTDVA 239 (609)
T ss_pred CCCCCHHHHHHCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCHHH
T ss_conf 88882456751666899756766626043477442057899999997899499989988737887271554657896599
Q ss_pred ----------------------------HHHHHHCCC------C----------------HHHHHHHHCCCCHHHHHHHH
Q ss_conf ----------------------------888882687------7----------------88999872353102354433
Q gi|254780859|r 430 ----------------------------ALADLVSGQ------H----------------PFFKKLQEATRPLIIVGQGA 459 (700)
Q Consensus 430 ----------------------------~l~~~~~g~------~----------------~~~~~l~~a~~~~ii~G~g~ 459 (700)
T Consensus 240 L~lam~~vii~e~l~D~~Fv~~~t~Gfe~~~~~l~g~~Dg~~~TPE~aa~itGVpa~~I~~lA~~~a~-~~~~i~~g~g~ 318 (609)
T cd02769 240 LMLALAHTLVTEGLHDKAFLARYTVGFDKFLPYLLGESDGVPKTPEWAAAICGIPAETIRELARRFAS-KRTMIMAGWSL 318 (609)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH-CCCEEEECCCC
T ss_conf 99999999998769737889863567899998751542355589999987868899999999999983-69758987756
Q ss_pred HHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCC----CCC-----CCCCCH---HHHH--------
Q ss_conf 21047469898989998874105853347542467531045210177----658-----652368---8886--------
Q gi|254780859|r 460 LRASDNVEVMANIAKLVIDVGGISDSWNGFAVLHTVASRVGALDLGF----VPA-----DDTINA---MNIL-------- 519 (700)
Q Consensus 460 ~~~~~g~~~~~al~~l~~~~G~ig~~g~G~~~L~~~~n~~Ga~d~g~----~P~-----~~~~~~---~~~~-------- 519 (700)
T Consensus 319 ~~~~~g~~~~rai~~L~altGnig~pGgg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pg~~~~ 398 (609)
T cd02769 319 QRAHHGEQPHWMAVTLAAMLGQIGLPGGGFGFGYHYSNGGGPPRGAAPPPALPQGRNPVSSFIPVARIADMLLNPGKPFD 398 (609)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
T ss_conf 51236318999999999984899998875168867678877434456656565555752222418899888757996321
Q ss_pred --------HCCCEEEECCCCHHH----------CCCCCCEEEHHHHHHHHHHHHCCEEECCCCCCCCCC-EEEEECCEEE
Q ss_conf --------016759980764220----------166543450221166668874557704786202472-0882088674
Q gi|254780859|r 520 --------DKTDIVFLLGADELD----------FSDKQALTVYIGSHGDRGAQSADVILPGAAYTEKSG-LWVNTEGRVQ 580 (700)
Q Consensus 520 --------~~~~~l~~~g~d~l~----------~~~~~~fvV~~d~~~t~tA~~ADVVLP~a~~~Ek~G-tf~N~EgRvQ 580 (700)
T Consensus 399 ~~g~~~~~p~ik~l~~~g~Np~~s~p~~~~~~eal~kld~~Vv~D~~~teTa~~ADiVLPaat~~E~~d~~~~~~~~~~~ 478 (609)
T cd02769 399 YNGKKLTYPDIKLVYWAGGNPFHHHQDLNRLIRAWQKPETVIVHEPFWTATARHADIVLPATTSLERNDIGGSGDNRYIV 478 (609)
T ss_pred HCHHHHCCCCCEEEEEECCCHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHCCEEECCCCCCCCCCCCCCCCCCCCE
T ss_conf 03133127774389994888100572899999998578809998477786541176897078735137852437885403
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 20443288555740799999999980779968
Q gi|254780859|r 581 MGMRAIFPPGDAKEDWEIICALADELKCSLPF 612 (700)
Q Consensus 581 ~~~~av~p~geak~dw~Il~~La~~LG~~~~~ 612 (700)
T Consensus 479 ~~~~aveP~gEak~d~eI~~eLA~rlG~~~~f 510 (609)
T cd02769 479 AMKQVVEPVGEARDDYDIFADLAERLGVEEQF 510 (609)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 20125589424658999999999972996757