HHsearch alignment for GI: 254780861 and conserved domain: COG1245
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only].
Probab=97.69 E-value=2.5e-05 Score=52.50 Aligned_cols=59 Identities=31% Similarity=0.576 Sum_probs=39.2
Q ss_pred EEEECCCCCCCEECCCCHHHHHHC-----CCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCHHHCCCCEEECCC
Q ss_conf 874058874221345223253308-----8321012245447335778885055558688723337831030367
Q gi|254780861|r 53 LRRYPNGEERCIACKLCEAICPAQ-----AITIESGPRCHDGTRRTVRYDIDMIKCIYCGLCQEACPVDAIVEGP 122 (163)
Q Consensus 53 l~~~~~~~ekCi~C~~C~~~CP~~-----aI~i~~~~~~~~~~~~~~~~~id~~~Ci~Cg~Cv~vCP~~AI~~~~ 122 (163)
T Consensus 8 vd~D~C~PkkC~--~eC~~yCP~vrtg~~~I~i~~~----~gkp-----vIsE~lCiGCGICvkkCPF~AI~Ivn 71 (591)
T COG1245 8 VDYDRCQPKKCG--YECIKYCPVVRTGKETIEIDED----TGKP-----VISEELCIGCGICVKKCPFDAISIVN 71 (591)
T ss_pred EEHHCCCCCCCC--HHHHHCCCCCCCCCEEEEECCC----CCCC-----EEEHHHHCCCHHHHCCCCCCEEEEEC
T ss_conf 632105864242--1145309984578726995477----7984-----36764423203431348866178843