HHsearch alignment for GI: 254780861 and conserved domain: PRK08348

>PRK08348 NADH-plastoquinone oxidoreductase subunit; Provisional.
Probab=97.42  E-value=5.5e-05  Score=50.35  Aligned_cols=21  Identities=33%  Similarity=1.015  Sum_probs=10.2

Q ss_pred             CCCEECCCCHHHHHHCCCCCC
Q ss_conf             422134522325330883210
Q gi|254780861|r   61 ERCIACKLCEAICPAQAITIE   81 (163)
Q Consensus        61 ekCi~C~~C~~~CP~~aI~i~   81 (163)
T Consensus        73 ~~Ci~Cg~C~~~CP~~AI~~t   93 (111)
T PRK08348         73 GRCVFCGQCVDVCPTGALQMS   93 (111)
T ss_pred             CCCCCCCCCCCCCCCCCEECC
T ss_conf             908538875773772836876