HHsearch alignment for GI: 254780861 and conserved domain: PRK08348
>PRK08348 NADH-plastoquinone oxidoreductase subunit; Provisional.
Probab=97.42 E-value=5.5e-05 Score=50.35 Aligned_cols=21 Identities=33% Similarity=1.015 Sum_probs=10.2
Q ss_pred CCCEECCCCHHHHHHCCCCCC
Q ss_conf 422134522325330883210
Q gi|254780861|r 61 ERCIACKLCEAICPAQAITIE 81 (163)
Q Consensus 61 ekCi~C~~C~~~CP~~aI~i~ 81 (163)
T Consensus 73 ~~Ci~Cg~C~~~CP~~AI~~t 93 (111)
T PRK08348 73 GRCVFCGQCVDVCPTGALQMS 93 (111)
T ss_pred CCCCCCCCCCCCCCCCCEECC
T ss_conf 908538875773772836876