HHsearch alignment for GI: 254780861 and conserved domain: PRK09130

Probab=98.71  E-value=8.3e-09  Score=73.78  Aligned_cols=82  Identities=20%  Similarity=0.381  Sum_probs=51.6

Q ss_pred             CCCCCCCCCCCCCHHCCCEEEEEECCCCCCCEECCCCHHHHHH----CCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCC
Q ss_conf             2257875775680005723787405887422134522325330----883210122454473357788850555586887
Q gi|254780861|r   33 TINYPFEKGSTSPRFRGEHALRRYPNGEERCIACKLCEAICPA----QAITIESGPRCHDGTRRTVRYDIDMIKCIYCGL  108 (163)
Q Consensus        33 T~~YP~e~~~~~~rfRG~~~l~~~~~~~ekCi~C~~C~~~CP~----~aI~i~~~~~~~~~~~~~~~~~id~~~Ci~Cg~  108 (163)
T Consensus       121 ~~r~~~~kr~~~~~~~g-p~i~~---~~~rCI~C~RCVR~~~ev~g~~~lg~~--~RG~-~~~i-~t~~~~~~~se~sGn  192 (680)
T PRK09130        121 TSRFHENKRAVEDKYMG-PLVKT---AMTRCIHCTRCVRFATEVAGVPELGAI--GRGE-DMEI-TTYLEQALTSELSGN  192 (680)
T ss_pred             CCCCCCCCCCCCCCCCC-CCEEC---CCCCCCCCCHHHHHHHCCCCCCEEEEE--CCCC-CCCC-CCCCCCCCCCCCCCC
T ss_conf             76567667677655689-62430---532042254467776403687557553--0366-5676-755578777644533


Q ss_pred             CHHHCCCCEEECCC
Q ss_conf             23337831030367
Q gi|254780861|r  109 CQEACPVDAIVEGP  122 (163)
Q Consensus       109 Cv~vCP~~AI~~~~  122 (163)
T Consensus       193 ~idvCPvGALtskp  206 (680)
T PRK09130        193 VIDLCPVGALTSKP  206 (680)
T ss_pred             HHHCCCCCCCCCCC
T ss_conf             23206644423564