HHsearch alignment for GI: 254780861 and conserved domain: PRK12769

Probab=98.46  E-value=5.5e-08  Score=68.74  Aligned_cols=66  Identities=24%  Similarity=0.526  Sum_probs=44.0

Q ss_pred             CHHCCCEEEEEECCCCC---CCEECC--CCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCHHHCCCCEEE
Q ss_conf             00057237874058874---221345--2232533088321012245447335778885055558688723337831030
Q gi|254780861|r   45 PRFRGEHALRRYPNGEE---RCIACK--LCEAICPAQAITIESGPRCHDGTRRTVRYDIDMIKCIYCGLCQEACPVDAIV  119 (163)
Q Consensus        45 ~rfRG~~~l~~~~~~~e---kCi~C~--~C~~~CP~~aI~i~~~~~~~~~~~~~~~~~id~~~Ci~Cg~Cv~vCP~~AI~  119 (163)
T Consensus        36 ~~f~pr~~v~~~~-~~~~~v~c~~ce~apc~~~cp~~ai~~~~~-----------~v~~~~~~cigc~~c~~acp~ga~~  103 (654)
T PRK12769         36 HHFHPRITVIKHQ-QQRSAVTCHHCEDAPCARSCPNGAISHVND-----------SIQVNQQKCIGCKSCVVACPFGTMQ  103 (654)
T ss_pred             CCCCCCEEEEECC-CCCCCCCCCCCCCCCHHHHCCCCCEEECCC-----------EEEEECCCCCCCCCHHHCCCCCCEE
T ss_conf             5456646999258-853360202479981565098310585298-----------7998312166862166508988549


Q ss_pred             CCC
Q ss_conf             367
Q gi|254780861|r  120 EGP  122 (163)
Q Consensus       120 ~~~  122 (163)
T Consensus       104 ~v~  106 (654)
T PRK12769        104 IVL  106 (654)
T ss_pred             EEE
T ss_conf             996