HHsearch alignment for GI: 254780861 and conserved domain: TIGR00402
>TIGR00402 napF ferredoxin-type protein NapF; InterPro: IPR004496 Members of this family are the ferredoxin-type protein subunits of nitrate reductase. These NapF proteins are involved in electron transfer, and contain iron-sulphur centres similar to those of bacterial-type 4FE-4S ferredoxins.; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0006118 electron transport.
Probab=98.50 E-value=4e-08 Score=69.59 Aligned_cols=51 Identities=29% Similarity=0.761 Sum_probs=40.9
Q ss_pred CCCEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCHHHCCCCEEE
Q ss_conf 42213452232533088321012245447335778885055558688723337831030
Q gi|254780861|r 61 ERCIACKLCEAICPAQAITIESGPRCHDGTRRTVRYDIDMIKCIYCGLCQEACPVDAIV 119 (163)
Q Consensus 61 ekCi~C~~C~~~CP~~aI~i~~~~~~~~~~~~~~~~~id~~~Ci~Cg~Cv~vCP~~AI~ 119 (163)
T Consensus 39 a~CtrCg~C~saCennil~~g~~-----G--~p-~v~fdn~eC~fCgkCa~aCp~~~f~ 89 (161)
T TIGR00402 39 ARCTRCGECLSACENNILQKGDA-----G--YP-EVEFDNAECDFCGKCAEACPESLFY 89 (161)
T ss_pred EEECCCCCHHHHCCCCEEEECCC-----C--CE-EEEEECCCCCCCCHHHHHCCCCCCC
T ss_conf 63188434030178450651678-----8--50-6887568767221226428755578