HHsearch alignment for GI: 254780861 and conserved domain: TIGR01582
>TIGR01582 FDH-beta formate dehydrogenase, beta subunit; InterPro: IPR006470 The sequences in this group represent the beta subunit of the gamma-proteobacterial formate dehydrogenase. This subunit contains four 4Fe-4S clusters and is involved in transmitting electrons from the alpha subunit (IPR006443 from INTERPRO) at the periplasmic space to the gamma subunit which spans the cytoplasmic membrane . In addition to the gamma proteobacteria, a sequence from Aquifex aolicus falls within this group. This appears to be the case for the alpha, gamma and epsilon (accessory protein IPR006452 from INTERPRO) chains as well. ; GO: 0008863 formate dehydrogenase activity, 0045333 cellular respiration, 0016021 integral to membrane.
Probab=95.32 E-value=0.012 Score=36.09 Aligned_cols=25 Identities=36% Similarity=0.740 Sum_probs=19.8
Q ss_pred EEHHHCCCCCCCHHHCCCCEEECCC
Q ss_conf 5055558688723337831030367
Q gi|254780861|r 98 IDMIKCIYCGLCQEACPVDAIVEGP 122 (163)
Q Consensus 98 id~~~Ci~Cg~Cv~vCP~~AI~~~~ 122 (163)
T Consensus 131 F~h~kCIGCgyCi~GCPFnIPR~~k 155 (293)
T TIGR01582 131 FDHEKCIGCGYCIVGCPFNIPRIDK 155 (293)
T ss_pred CCCCCEECCCCCCCCCCCCCCCCCC
T ss_conf 1158600067302587888888874