HHsearch alignment for GI: 254780861 and conserved domain: TIGR01973
>TIGR01973 NuoG NADH-quinone oxidoreductase, chain G; InterPro: IPR010228 This entry represents the G subunit (one of 14 subunits, A to N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This family does not contain related subunits from formate dehydrogenase complexes.; GO: 0016651 oxidoreductase activity acting on NADH or NADPH, 0051536 iron-sulfur cluster binding.
Probab=96.71 E-value=0.0011 Score=42.49 Aligned_cols=85 Identities=16% Similarity=0.343 Sum_probs=56.6
Q ss_pred CCCCCCCCCC-CCCCCCHHCCCEEEEEECCCCCCCEECCCCHHHHH----HCCCCCCCCCCCCCCCEEEEEEEEEHHHCC
Q ss_conf 9852257875-77568000572378740588742213452232533----088321012245447335778885055558
Q gi|254780861|r 30 AKTTINYPFE-KGSTSPRFRGEHALRRYPNGEERCIACKLCEAICP----AQAITIESGPRCHDGTRRTVRYDIDMIKCI 104 (163)
Q Consensus 30 ~~~T~~YP~e-~~~~~~rfRG~~~l~~~~~~~ekCi~C~~C~~~CP----~~aI~i~~~~~~~~~~~~~~~~~id~~~Ci 104 (163)
T Consensus 128 G~~~sRf~e~GKR~~~~~~~GPliv~---t~M~RCI~CtRCVRF~~evAG~~~LG~--~gRG--~~~~igty~~~~l~SE 200 (715)
T TIGR01973 128 GSDRSRFREKGKRTVEDKYLGPLIVK---TEMTRCIHCTRCVRFANEVAGVEELGV--IGRG--NHVEIGTYEGKTLESE 200 (715)
T ss_pred CCCCCCEECCCCCCCCCCCCCCCEEE---ECCCCCCCCCEEEEEEEECCCCCEECC--EECC--CCCEEEEEECCEECCC
T ss_conf 47875132144334468888872030---012345343001223110189701212--5178--7316864307700224
Q ss_pred CCCCCHHHCCCCEEECC
Q ss_conf 68872333783103036
Q gi|254780861|r 105 YCGLCQEACPVDAIVEG 121 (163)
Q Consensus 105 ~Cg~Cv~vCP~~AI~~~ 121 (163)
T Consensus 201 lSGN~id~CPVGALTsK 217 (715)
T TIGR01973 201 LSGNLIDICPVGALTSK 217 (715)
T ss_pred CCCCEEEECCCCCCCCC
T ss_conf 45352677675531785