HHsearch alignment for GI: 254780861 and conserved domain: TIGR02163
>TIGR02163 napH_ ferredoxin-type protein, NapH/MauN family; InterPro: IPR011886 Most members of this family are the NapH protein, found next to NapG,in operons that encode the periplasmic nitrate reductase. Some species with this reductase lack NapC but accomplish electron transfer to NapAB in some other manner, likely to involve NapH, NapG, and/or some other protein. A few members of this protein are designated MauN and are found in methylamine utilization operons in species that appear to lack a periplasmic nitrate reductase.; GO: 0005506 iron ion binding, 0006118 electron transport.
Probab=98.87 E-value=5.8e-10 Score=80.86 Aligned_cols=69 Identities=25% Similarity=0.594 Sum_probs=46.8
Q ss_pred CCEEEEEEC-CCCCCCEECCCCHHHHHH-CCCCCCCCCC--CCCCCEEEEEEEEEHHHCCCCCCCHHHCCCCEEECCC
Q ss_conf 723787405-887422134522325330-8832101224--5447335778885055558688723337831030367
Q gi|254780861|r 49 GEHALRRYP-NGEERCIACKLCEAICPA-QAITIESGPR--CHDGTRRTVRYDIDMIKCIYCGLCQEACPVDAIVEGP 122 (163)
Q Consensus 49 G~~~l~~~~-~~~ekCi~C~~C~~~CP~-~aI~i~~~~~--~~~~~~~~~~~~id~~~Ci~Cg~Cv~vCP~~AI~~~~ 122 (163)
T Consensus 191 G~~s~~ki~~~~~~~C~~Cm~C~~vCpEp~VL~~~~k~~~~~~~~s~~-----V~SgdC~~CGRCIDVC~~~vl~f~~ 263 (263)
T TIGR02163 191 GRKSLIKIAASDREKCTNCMDCFNVCPEPQVLRMPLKKEEDAKGGSTL-----VLSGDCINCGRCIDVCAEDVLGFTT 263 (263)
T ss_pred HHHHHHHEEECCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCE-----EECCCCCCCCCEEEECCCCCCCCCC
T ss_conf 401432124302322687757760158520125000675555679823-----6662415667612442766231269