HHsearch alignment for GI: 254780861 and conserved domain: TIGR03149

>TIGR03149 cyt_nit_nrfC cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase.

Probab=98.52  E-value=1.2e-07  Score=66.67  Aligned_cols=56  Identities=29%  Similarity=0.672  Sum_probs=43.1

Q ss_pred             CCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCC----------CCHHHCCCCEEECCCCCCCC
Q ss_conf             8742213452232533088321012245447335778885055558688----------72333783103036773567
Q gi|254780861|r   59 GEERCIACKLCEAICPAQAITIESGPRCHDGTRRTVRYDIDMIKCIYCG----------LCQEACPVDAIVEGPNFEFA  127 (163)
Q Consensus        59 ~~ekCi~C~~C~~~CP~~aI~i~~~~~~~~~~~~~~~~~id~~~Ci~Cg----------~Cv~vCP~~AI~~~~~~e~a  127 (163)
T Consensus       123 d~~~CiGC~~C~~aCPy~a~~~~~~~~~-------------~~KC~~C~~~r~~~G~~PaCv~aCp~~A~~FGdl~Dp~  188 (225)
T TIGR03149       123 HKDLCVGCQYCIAACPYRVRFIHPVTKS-------------ADKCNFCRDTNLAEGKLPACVESCPTKALTFGDLNDPN  188 (225)
T ss_pred             EHHHCCCHHHHHHCCCCCCCEECCCCCC-------------CCCCCCCCCCHHHCCCCCCCHHHCCCCCEEEECCCCCC
T ss_conf             5686940418986199998354888896-------------87370860027567998871423877787882288981