HHsearch alignment for GI: 254780861 and conserved domain: TIGR03287
>TIGR03287 methan_mark_16 putative methanogenesis marker 16 metalloprotein. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. This protein is a predicted to bind FeS clusters, based on the presence of two copies of the Fer4 domain (pfam00037), with each copy having four Cys residues invariant across all members.
Probab=91.20 E-value=0.065 Score=31.55 Aligned_cols=22 Identities=45% Similarity=0.931 Sum_probs=10.7
Q ss_pred EEHHHCCCCCCC--HHHCCCCEEE
Q ss_conf 505555868872--3337831030
Q gi|254780861|r 98 IDMIKCIYCGLC--QEACPVDAIV 119 (163)
Q Consensus 98 id~~~Ci~Cg~C--v~vCP~~AI~ 119 (163)
T Consensus 299 ~~p~~C~~C~~C~~~~~CP~~ai~ 322 (391)
T TIGR03287 299 YNPERCENCDPCLVEEACPVPAIK 322 (391)
T ss_pred CCCCCCCCCCCHHHHHCCCCCCCC
T ss_conf 171004557400354408842014