HHsearch alignment for GI: 254780861 and conserved domain: TIGR03294

>TIGR03294 FrhG coenzyme F420 hydrogenase, subunit gamma. This model represents that clade of F420-dependent hydrogenases (FRH) beta subunits found exclusively and universally in methanogenic archaea. This protein contains two 4Fe-4S cluster binding domains (pfam00037) and scores above the trusted cutoff to model pfam01058 for the "NADH ubiquinone oxidoreductase, 20 Kd subunit" family.
Probab=98.82  E-value=1.1e-09  Score=79.26  Aligned_cols=48  Identities=35%  Similarity=0.915  Sum_probs=40.6

Q ss_pred             CCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCHHHCCCCE
Q ss_conf             87422134522325330883210122454473357788850555586887233378310
Q gi|254780861|r   59 GEERCIACKLCEAICPAQAITIESGPRCHDGTRRTVRYDIDMIKCIYCGLCQEACPVDA  117 (163)
Q Consensus        59 ~~ekCi~C~~C~~~CP~~aI~i~~~~~~~~~~~~~~~~~id~~~Ci~Cg~Cv~vCP~~A  117 (163)
T Consensus       172 n~~LC~GCg~Ca~~Cp~~AI~~~~gkp-----------~i~~~~Ci~CG~C~~~CPr~~  219 (228)
T TIGR03294       172 NQGLCMGCGTCAAACPTRAIEMEDGRP-----------NVNRDRCIKCGACYVQCPRAF  219 (228)
T ss_pred             CCCCCCCCHHHHHHCCCCCCEEECCCE-----------EECHHHCCCCCCCCCCCCCCC
T ss_conf             632167815778548857625653836-----------776322776774412197642