HHsearch alignment for GI: 254780861 and conserved domain: TIGR03294
>TIGR03294 FrhG coenzyme F420 hydrogenase, subunit gamma. This model represents that clade of F420-dependent hydrogenases (FRH) beta subunits found exclusively and universally in methanogenic archaea. This protein contains two 4Fe-4S cluster binding domains (pfam00037) and scores above the trusted cutoff to model pfam01058 for the "NADH ubiquinone oxidoreductase, 20 Kd subunit" family.
Probab=97.02 E-value=0.00017 Score=47.43 Aligned_cols=26 Identities=35% Similarity=0.749 Sum_probs=23.3
Q ss_pred EEHHHCCCCCCCHHHCCCCEEECCCC
Q ss_conf 50555586887233378310303677
Q gi|254780861|r 98 IDMIKCIYCGLCQEACPVDAIVEGPN 123 (163)
Q Consensus 98 id~~~Ci~Cg~Cv~vCP~~AI~~~~~ 123 (163)
T Consensus 171 in~~LC~GCg~Ca~~Cp~~AI~~~~g 196 (228)
T TIGR03294 171 VNQGLCMGCGTCAAACPTRAIEMEDG 196 (228)
T ss_pred CCCCCCCCCHHHHHHCCCCCCEEECC
T ss_conf 46321678157785488576256538