RPSBLAST alignment for GI: 254780861 and conserved domain: TIGR01944
>gnl|CDD|162616 TIGR01944, rnfB, electron transport complex, RnfABCDGE type, B subunit. The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the B subunit. Length = 165
Score = 38.2 bits (89), Expect = 0.001
Identities = 14/27 (51%), Positives = 15/27 (55%)
Query: 98 IDMIKCIYCGLCQEACPVDAIVEGPNF 124
ID CI C C +ACPVDAIV
Sbjct: 110 IDEDNCIGCTKCIQACPVDAIVGAAKA 136