HHsearch alignment for GI: 254780862 and conserved domain: MTH00015
>MTH00015 ND6 NADH dehydrogenase subunit 6; Validated.
Probab=96.99 E-value=0.02 Score=31.70 Aligned_cols=144 Identities=20% Similarity=0.306 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99999999999999724289999999999999999999808707999999999999999999999981731112123322
Q gi|254780862|r 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKK 89 (199)
Q Consensus 10 ~~a~l~i~sal~vi~~kn~v~s~l~Li~~f~~vAgl~~lL~aeFla~~qIlVYvGAI~VLflFvIMll~~~~~~~~~~~~ 89 (199)
T Consensus 5 ~l~sl~~s~~l~lpL~~~PLsLGl~Il~~al~~s~~~a~~~SSWf~~ilFLIYIGGmLVMFAYfaAlsP---Nq~-~~~~ 80 (155)
T MTH00015 5 MFFILMIASTFMLFLASTPIMLGINILAMALLLAATFASFMSSWFAFLIFLIYIGGMLVMFAYFLALTP---NQQ-IPNF 80 (155)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH---HHH-HCCC
T ss_conf 999999999999888168399999999999999999999998999999999999479999999999080---677-4123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 100124689999999999999776621566655434461138999999987-5269999999999999999999997505
Q gi|254780862|r 90 RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYT-QYAYPLEISGFILLLSMIGAIVLMLRHR 168 (199)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~L~t-~y~~~fel~sviLLvamiGAi~La~~~~ 168 (199)
T Consensus 81 ~~~~~~-~i~~~~~~----~~~~~~~~~~~------~~~~~~~-~~~~lys~~~~~ili~L~~iLll~Li~VVKi~~~~~ 148 (155)
T MTH00015 81 NIILYA-LITIITFS----ALMLLTNIKIP------IFNDISQ-GNQILYMLDSAPFLIILALILLLTMVIVVKLTSRSK 148 (155)
T ss_pred HHHHHH-HHHHHHHH----HHHHHCCCCCC------HHHHCCC-HHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCC
T ss_conf 089999-99999999----99984678872------1520120-278987368857999999999999886045542478
Q ss_pred C
Q ss_conf 8
Q gi|254780862|r 169 R 169 (199)
Q Consensus 169 ~ 169 (199)
T Consensus 149 G 149 (155)
T MTH00015 149 G 149 (155)
T ss_pred C
T ss_conf 9