HHsearch alignment for GI: 254780862 and conserved domain: MTH00166
>MTH00166 ND6 NADH dehydrogenase subunit 6; Provisional.
Probab=96.38 E-value=0.056 Score=29.23 Aligned_cols=155 Identities=15% Similarity=0.208 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 9999999999972428999999999999999999980-870799999999999999999999998173111212332210
Q gi|254780862|r 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLL-GAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRG 91 (199)
Q Consensus 13 ~l~i~sal~vi~~kn~v~s~l~Li~~f~~vAgl~~lL-~aeFla~~qIlVYvGAI~VLflFvIMll~~~~~~~~~~~~~~ 91 (199)
T Consensus 7 ~~~~~~s~~f~~~~hPl~m~l~li~~tl~~sl~~~~~~~s~WfsyiLfLI~iGGmlVlF~Y~~Sl~~--Nekf~~~~~~- 83 (164)
T MTH00166 7 SLSLILSLIFLFSNHPLSMGLMLLIQTLLISLLTGLMMKSFWFSYILFLIFLGGMLVLFIYVTSLAS--NEKFKFSIKL- 83 (164)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--HHHHHHHHHH-
T ss_conf 9999999999987687999999999999999999999976999999999999789999999999641--5566655899-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 01246899999999999997766215666554344611389999999875269999999999999999999997505887
Q gi|254780862|r 92 FLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171 (199)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~L~t~y~~~fel~sviLLvamiGAi~La~~~~~~~ 171 (199)
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~lf~~~~~~~~i~l~~yLl~~Li~Vvki~~~~~-GP 159 (164)
T MTH00166 84 LLFFLFILLIMSILLFITDKLLFNNFI---KNTEMKNENSLSLNKLYNFPTMLITLFMIIYLLLTLIVVVKITKIFK-GP 159 (164)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CC
T ss_conf 999999999999999986588899888---88888678899999999764899999999999999999999986788-99
Q ss_pred CCC
Q ss_conf 546
Q gi|254780862|r 172 KRQ 174 (199)
Q Consensus 172 krq 174 (199)
T Consensus 160 LR~ 162 (164)
T MTH00166 160 LRS 162 (164)
T ss_pred CCC
T ss_conf 999