HHsearch alignment for GI: 254780862 and conserved domain: MTH00214
>MTH00214 ND6 NADH dehydrogenase subunit 6; Provisional.
Probab=96.55 E-value=0.00029 Score=41.66 Aligned_cols=158 Identities=16% Similarity=0.289 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99999999999999724289999999999999999999808707999999999999999999999981731112123322
Q gi|254780862|r 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKK 89 (199)
Q Consensus 10 ~~a~l~i~sal~vi~~kn~v~s~l~Li~~f~~vAgl~~lL~aeFla~~qIlVYvGAI~VLflFvIMll~~~~~~~~~~~~ 89 (199)
T Consensus 3 ll~v~~v~G~v~VasnpSPyfgalgLV~~a~~GC~il~~~G~sFlsLvLfLIYLGGMLVVFaYS~ALaae~yPe~-wg~~ 81 (162)
T MTH00214 3 ILMFLFLLGLMMVIRAPSPYFGALGLVVLALVGCFLLLQMGGSFLSLILVLIYLGGMLVVFSYSAALAADLYPEP-WGMT 81 (162)
T ss_pred EEHHHHHHHHHEEECCCCHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCC-CCCC
T ss_conf 641678761214786897488859999988331351441698489999999983987996665445666788731-2673
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 10012468999999999999977662156665543446113899999998752699999999999999999999975058
Q gi|254780862|r 90 RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169 (199)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~L~t~y~~~fel~sviLLvamiGAi~La~~~~~ 169 (199)
T Consensus 82 ~v~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~Gg~~l~~~gw~LlltLfvVLEltRG~~r 156 (162)
T MTH00214 82 SVLL-YALF----GTLLILMIGWPFLEGFCEISWWSLYSLNFFYLLFGLYERGGLLLVLAGWVLLLLLFSILEVVRGVKW 156 (162)
T ss_pred EEEE-EEEE----EEEEEEEEEEEEECCEEECCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEEEEECCCCC
T ss_conf 5645-7789----8999999999995877961507996357528998851487899889999999986478999057871
Q ss_pred CCCC
Q ss_conf 8754
Q gi|254780862|r 170 DIKR 173 (199)
Q Consensus 170 ~~kr 173 (199)
T Consensus 157 G~lR 160 (162)
T MTH00214 157 GALR 160 (162)
T ss_pred CEEE
T ss_conf 7171