HHsearch alignment for GI: 254780862 and conserved domain: PRK06433

>PRK06433 NADH dehydrogenase subunit J; Provisional.
Probab=99.97  E-value=3.2e-30  Score=182.84  Aligned_cols=86  Identities=29%  Similarity=0.500  Sum_probs=82.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             95799999999999999999999724289999999999999999999808707999999999999999999999981731
Q gi|254780862|r    1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDID   80 (199)
Q Consensus         1 M~~~~i~F~~~a~l~i~sal~vi~~kn~v~s~l~Li~~f~~vAgl~~lL~aeFla~~qIlVYvGAI~VLflFvIMll~~~   80 (199)
T Consensus         2 m~~e~i~F~~~a~~~v~~al~vv~~rn~Vhsal~L~~~~~~vA~ly~ll~AeFla~vQilVY~GAi~vL~lF~vMLt~~~   81 (89)
T PRK06433          2 MAYETLVFALFAILTVGFSVGVVLAKDVWHSALYLGIFLFSVAVLYIMLGASFLGVVQVLVYIGAVLILITFAVMLTKRQ   81 (89)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             71699999999999999998998722699999999999999999999926889999999999809999999999982877


Q ss_pred             HHHHHH
Q ss_conf             112123
Q gi|254780862|r   81 IEVAEP   86 (199)
Q Consensus        81 ~~~~~~   86 (199)
T Consensus        82 ~~~~~~   87 (89)
T PRK06433         82 IGGEEI   87 (89)
T ss_pred             CCCCCC
T ss_conf             676778