HHsearch alignment for GI: 254780862 and conserved domain: PRK06439

>PRK06439 NADH dehydrogenase subunit J; Provisional.
Probab=97.76  E-value=1.5e-05  Score=48.60  Aligned_cols=45  Identities=22%  Similarity=0.485  Sum_probs=38.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             434461138999999987526999999999999999999999750
Q gi|254780862|r  123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH  167 (199)
Q Consensus       123 ~~~~~~~~~~~iG~~L~t~y~~~fel~sviLLvamiGAi~La~~~  167 (199)
T Consensus        27 tFi~~sQnIs~iG~~lFntYivPFELlSviiV~aviGVMYva~~e   71 (72)
T PRK06439         27 TFIPVSQNISRIGTELFNTYIVPFELLSVIIVGAVIGVMYVAWGE   71 (72)
T ss_pred             CEEECCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHEEEEEECCC
T ss_conf             257626427688788771003159999999999977368996068