HHsearch alignment for GI: 254780864 and conserved domain: COG1006
>COG1006 MnhC Multisubunit Na+/H+ antiporter, MnhC subunit [Inorganic ion transport and metabolism].
Probab=96.65 E-value=0.011 Score=34.10 Aligned_cols=68 Identities=21% Similarity=0.344 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 9699999999999999999737-----------------83159999999999999999999999999972178579999
Q gi|254780864|r 1 MSIELMLLAVNLNMISFSAYMQ-----------------DISGQIFSLFILLVAAAETSIGLAILVIFYRKCGSISVDDF 63 (68)
Q Consensus 1 m~iElmLnavnl~~v~f~~~~~-----------------~~~Gqi~~lfil~iAAaEaAiGLAi~v~~yR~~~si~~d~~ 63 (68)
T Consensus 30 igl~i~~~~vnL~i~~~G~~~~~~~Pi~~~~~~~~~~~aDPlPQALILTAIVIgfa~tal~L~l~~~~y~~~~T~~~~~~ 109 (115)
T COG1006 30 IGLSLIGTGVNLFLLLIGYLTGGGPPILSGGLVDATTYVDPLPQALILTAIVIGFATTALALVLAYRAYKEYGTLDVDEL 109 (115)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99999986698986432124688999878664566566895048999999999999999999999999888188668886
Q ss_pred HHCCC
Q ss_conf 62189
Q gi|254780864|r 64 NQMKG 68 (68)
Q Consensus 64 ~~LkG 68 (68)
T Consensus 110 ~~~~~ 114 (115)
T COG1006 110 RRERE 114 (115)
T ss_pred HCCCC
T ss_conf 03458