RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780864|ref|YP_003065277.1| NADH-ubiquinone oxidoreductase, chain 4L [Candidatus Liberibacter asiaticus str. psy62] (68 letters) >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), structural genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} (A:1-45,A:138-253) Length = 161 Score = 23.9 bits (51), Expect = 9.1 Identities = 6/33 (18%), Positives = 17/33 (51%) Query: 16 SFSAYMQDISGQIFSLFILLVAAAETSIGLAIL 48 ++S Y+ DI G + + + + ++ + +L Sbjct: 30 NYSTYLLDIEGTVCPIKRVFIYSSGSVKAQKLL 62 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.330 0.141 0.381 Gapped Lambda K H 0.267 0.0656 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 422,838 Number of extensions: 12256 Number of successful extensions: 42 Number of sequences better than 10.0: 1 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 3 Length of query: 68 Length of database: 4,956,049 Length adjustment: 35 Effective length of query: 33 Effective length of database: 3,772,874 Effective search space: 124504842 Effective search space used: 124504842 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 50 (23.2 bits)