HHsearch alignment for GI: 254780865 and conserved domain: COG1007
>COG1007 NuoN NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion].
Probab=100.00 E-value=0 Score=452.88 Aligned_cols=393 Identities=22% Similarity=0.350 Sum_probs=322.8
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8743378999999999999999997475306-888661899999999999999986558999988888856889988762
Q gi|254780865|r 81 LRIDTLSSVMFVVVNSISAVVHIYSIGYMHD-DPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFW 159 (666)
Q Consensus 81 ~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~-~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~ 159 (666)
T Consensus 64 ~~~d~~a~~~~~~~l~~s~~~l~~s~~~~~~~~~~~~Efy~L~l~a~lG~~~~~sa~~l~~lfiglEl~Sl~~Y~L~a~~ 143 (475)
T COG1007 64 FIVDALALLMKIVVLLASLAALILSLPYLERAGTFKGEFYALLLFATLGMIVMASANNLLLLFIGLELLSLALYVLAALR 143 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 87746899999999999999999857999966875258999999999999999984109999999999999999999841
Q ss_pred CCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 03445410363000221224789999999999996205989999875431000124555566666666532024553179
Q gi|254780865|r 160 SFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSI 239 (666)
Q Consensus 160 ~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (666)
T Consensus 144 r~~~~s~EaalKYfvlGalsS~~~l~G~al~Y~~tGsl~l~~i~~~~~~-~-----------------------~~~~~l 199 (475)
T COG1007 144 RDSKRSSEAALKYFVLGALSSAFLLYGIALVYGATGSLSLSGIAAYLNG-G-----------------------GEPLGL 199 (475)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC-C-----------------------CCCHHH
T ss_conf 7764125777899988989999999999999961788761788865126-7-----------------------642499
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999998654334323431240000-23322100013456666777999963013--5781344445677777887
Q gi|254780865|r 240 AIICLLFFLGAMGKSAQLLLHVWLPDAME-GPTPVSALIHAATMVTAGVFLVARMSPLF--ELSPFVLDCITVLGCITAF 316 (666)
Q Consensus 240 ~~~~~l~~~g~~~K~a~~P~h~WLp~A~~-aPtpvSAllhs~~mv~~Gvy~l~r~~~~~--~~~~~~~~~~~~~g~~t~~ 316 (666)
T Consensus 200 ~~g~vfii~gl~FKlsavPFH~W~PDVYeGApt~v~afls~a~-Kia~f~vl~Ri~~~~~~~~~~~~~~i~~iiAv~SM~ 278 (475)
T COG1007 200 LLGLVFIIAGLGFKLSAVPFHMWTPDVYEGAPTPVTAFLSTAP-KIAAFAVLLRIFVTAFGPDAPDWYLIFAIIAVASML 278 (475)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9999999999999973476201574011699930789987527-899999999999970676421599999999999999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 6300111024520244321000135334456553---11100346555310001222210123211100-0011012776
Q gi|254780865|r 317 FAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCR---AYGASIFHLFTHAFFKALLFLGSGSVIHAVAG-EQDMRRMGGL 392 (666)
Q Consensus 317 ~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~---~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~-~~~i~~~gGl 392 (666)
T Consensus 279 ~GN~~Al~Q~nvKRlLAYSSIah~Gy~L~gl~a~~~~g~~a~~~y~l~Y~~~~lgaf~~v~~~-~~~~~~~~~~~~~~GL 357 (475)
T COG1007 279 VGNFAALSQTNVKRLLAYSSIAHMGYLLVGLAAVTVGGYAAVLFYLLAYAFMSLGAFGVVALL-SSKEGGAESISDLAGL 357 (475)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCHHHHCCC
T ss_conf 999999985159999998489889999999997030222369999999999998999999998-6678875324644050
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 15466999999988642101100000000244321788888898641024444421022113454333103424578744
Q gi|254780865|r 393 YPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMR 472 (666)
Q Consensus 393 ~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~ 472 (666)
T Consensus 358 ~~~~P~~A~~~~i~m~SLaGIP------P~~GF~gK~~vf~~av~~~~-~~Laii~vl~S~isa~YYlRvv~~m~~~~~~ 430 (475)
T COG1007 358 SKRHPLLAALLTILMLSLAGIP------PLAGFWGKFYVFLAAVQAGL-WWLAVIAVLNSAISAYYYLRVVKAMYFEEPE 430 (475)
T ss_pred CCCCCHHHHHHHHHHHHHCCCC------CHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 3368689999999999975898------40129999999999997386-9999999999799899999999999707864
Q ss_pred CCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 33210000001355333202456566632100000124
Q gi|254780865|r 473 VDKDISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVF 510 (666)
Q Consensus 473 ~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~ 510 (666)
T Consensus 431 ~~~~~~~~----~~~~~~~~~~~~i~~~~lgi~~~~~~ 464 (475)
T COG1007 431 GAFRDAPQ----YTALKAVLLVAAILVLVLGILPQPVI 464 (475)
T ss_pred CCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44555445----55037999999999999997039899