HHsearch alignment for GI: 254780865 and conserved domain: COG1009

>COG1009 NuoL NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism].
Probab=100.00  E-value=0  Score=976.98  Aligned_cols=597  Identities=46%  Similarity=0.787  Sum_probs=524.9

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEH
Q ss_conf             89999999999999973012421478999999999999999999999725898528999753101308822357787433
Q gi|254780865|r    6 EVIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRIDT   85 (666)
Q Consensus         6 ~l~~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~D~   85 (666)
T Consensus         2 ~l~~~lPli~~li~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~----~~~~~W~~~~~~--~~~~~iD~   74 (606)
T COG1009           2 LLIILLPLIGALIALLLGR-TGRRLAAWLALLAPLVSLLLSALILFIVLAGPVL----VTLYTWLPSGGL--NFGLRIDG   74 (606)
T ss_pred             CHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE----EEEEEEEEECCC--EEEEEECH
T ss_conf             0799999999999998443-0244305888999999999999999998059841----588886650783--16899756


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf             78999999999999999997475306888661899999999999999986558999988888856889988762034454
Q gi|254780865|r   86 LSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESA  165 (666)
Q Consensus        86 ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~  165 (666)
T Consensus        75 Ls~lm~~lVt~vg~LI~iYsi~YM~~d~~~~RFfa~l~lF~~sMl~lVlSdNll~l~~~WE~~gl~SyLLIGfw~~~~~a  154 (606)
T COG1009          75 LSLLMALLVTGVGFLIHLYSIGYMSHDPGLGRFFAYLLLFTGSMLGLVLSDNLLLLFVFWELTGLASYLLIGFWYSRPSA  154 (606)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf             78999999999999999997998245998570999999999999999982859999999999999988720002698536


Q ss_pred             HCCCCCEEHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             103630002212247899999999999962-0598999987543100012455556666666653202455317999999
Q gi|254780865|r  166 IKASMKAFVVNRIGDLGLILAISAIIYLFH-SVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICL  244 (666)
Q Consensus       166 ~~a~~k~~~~~~~g~~~~l~~i~~l~~~~g-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (666)
T Consensus       155 ~~aA~kAflvtrvGdl~ll~gi~~L~~~~G~~~~~~~l~~~~~~----------------------~~~~~-~~~~~~~l  211 (606)
T COG1009         155 RRAARKAFLVTRVGDLGLLLGIILLYLLTGTTLLSEELFAAALF----------------------ADISP-PLLTLILL  211 (606)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCH----------------------HHHCC-HHHHHHHH
T ss_conf             69998874301126899999999999995763017888621101----------------------12111-28999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99999865433432343124000023322100013456666777999963013578134444567777788763001110
Q gi|254780865|r  245 LFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGLV  324 (666)
Q Consensus       245 l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~  324 (666)
T Consensus       212 ll~~Ga~~KSAQfPfH~WLpdAMegPTPVSAliHaATMV~AGvyLvaR~~pif~~sp~~~~~v~~vG~iTal~~a~~al~  291 (606)
T COG1009         212 LLLLGAFGKSAQFPFHTWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPEALWLVILVGAVTALLAALIALV  291 (606)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998636633060376553664489849999998688971625796887875357899999999999999999999999


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCCCCCC--CCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             24520244321000135334456553--1110034655531000122221012321110000110127761546699999
Q gi|254780865|r  325 QHDIKRVIAYSTCSQLGYMFVALGCR--AYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWM  402 (666)
Q Consensus       325 q~d~Kr~lAySsis~~G~i~~~~g~~--~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~  402 (666)
T Consensus       292 Q~DiKriLAYSTiSQLG~m~~a~Glg~~a~~aAifHL~tHA~FKA~LFL~aG~vih~-~~trdi~kmggL~k~mPit~~~  370 (606)
T COG1009         292 QNDIKRILAYSTISQLGYMFVALGLGSLAYEAAIFHLVTHAFFKALLFLSAGSVIHA-TGTRDIRKLGGLRKKMPITFVA  370 (606)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH-CCCCCHHHHHCHHHHCHHHHHH
T ss_conf             999999999988999999999984427799999999999999999999841503887-1654088741678766399999


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
Q ss_conf             998864210110000000024432178888889864102--444442102211345433310342457874433210000
Q gi|254780865|r  403 MIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHF--TFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISHK  480 (666)
Q Consensus       403 ~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~--~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~~  480 (666)
T Consensus       371 ~~ig~lalaGvp------Pf~GF~SK~~i~~~~~~~~~~~~~~~~~~~~i~~~~T~~ys~r~~~~~F~g~~~~~~~~~-~  443 (606)
T COG1009         371 FLIGALALAGVP------PFAGFFSKDMILEAALAASHLSGGLLLLLALIGALLTAFYSFRLIFLVFFGKPREPEELP-H  443 (606)
T ss_pred             HHHHHHHHHCCC------CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-C
T ss_conf             999999981787------320699999999999972543333899999999999999999999951478998744466-7


Q ss_pred             HCCCCCCCCCCHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf             001355333202456566632100000124-67642113455433575333201233688999999-9999999999999
Q gi|254780865|r  481 IHESPLVMQIPLFILAIGSIFFGFIFHDVF-FGSAYSSFWKGALFASSSNNVLERYHEVPLWVEYS-SFIAFFVGFFSAF  558 (666)
Q Consensus       481 ~~e~~~~m~~pl~vLa~~si~~G~~~~~~~-~~~~~~~~~~~~l~~~~~~~~l~~~~~~~l~~~~i-~ll~~iiGi~la~  558 (666)
T Consensus       444 ~he~p~~m~lp~~iL~~~s~~~G~~~~~~~~~~~~~~-----------~~~~~----~~~l~~~~~~pl~~si~g~~~~~  508 (606)
T COG1009         444 AHEAPWVMLLPLVVLAILSLILGLLILAPFLFPAVFA-----------ADELL----HLALWHGLNLPLLLSIVGIVLGI  508 (606)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----------CCCCC----CCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7889810459899999999999998765653020103-----------45332----10137752358999999999999


Q ss_pred             HHHHHCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99870401246656411258999870578168999999999999999999987557665341549999999999998850
Q gi|254780865|r  559 LMYIICPSLPKFLSEKCRFFYCFLQNAWYFDRIYDCLLVRPIVRLATILWKRVDLSIDKYGPGGIVACVRYLSSYSSRLQ  638 (666)
Q Consensus       559 lly~~~~~~~~~~~~~~~~l~~~l~~~~y~d~lY~~~ivk~~~~ls~~l~~~~D~~i~d~~v~gi~~~v~~~s~~lr~lQ  638 (666)
T Consensus       509 ~~y~~-~~~~~~~~~~~-~~~~~~~~~~~~~~ly~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  585 (606)
T COG1009         509 LLYLK-PILKKSILGLF-GLYTLLYNDYYLDKLYTLVFVKTVALLAGRLWDYFDLTFIDGIVNLG-RVTLFSGNGLRRSQ  585 (606)
T ss_pred             HHHHH-HHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCEEEEEC
T ss_conf             99961-56677775100-57899999988998878766898999998899878889886432000-00001353345405


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q ss_conf             96288999999999999999
Q gi|254780865|r  639 TGYLDHYAFSMLIGISILVI  658 (666)
Q Consensus       639 tG~i~~Yi~~i~igl~llli  658 (666)
T Consensus       586 ~g~~~~~~~~~~~~~~~~~~  605 (606)
T COG1009         586 TGYLQLYALSLVVGALLLLI  605 (606)
T ss_pred             CCHHHHHHHHHHHHHHHHHC
T ss_conf             55899999999999999870