HHsearch alignment for GI: 254780865 and conserved domain: COG1009
>COG1009 NuoL NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism].
Probab=100.00 E-value=0 Score=976.98 Aligned_cols=597 Identities=46% Similarity=0.787 Sum_probs=524.9
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEH
Q ss_conf 89999999999999973012421478999999999999999999999725898528999753101308822357787433
Q gi|254780865|r 6 EVIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRIDT 85 (666)
Q Consensus 6 ~l~~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~D~ 85 (666)
T Consensus 2 ~l~~~lPli~~li~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~----~~~~~W~~~~~~--~~~~~iD~ 74 (606)
T COG1009 2 LLIILLPLIGALIALLLGR-TGRRLAAWLALLAPLVSLLLSALILFIVLAGPVL----VTLYTWLPSGGL--NFGLRIDG 74 (606)
T ss_pred CHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE----EEEEEEEEECCC--EEEEEECH
T ss_conf 0799999999999998443-0244305888999999999999999998059841----588886650783--16899756
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 78999999999999999997475306888661899999999999999986558999988888856889988762034454
Q gi|254780865|r 86 LSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESA 165 (666)
Q Consensus 86 ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~ 165 (666)
T Consensus 75 Ls~lm~~lVt~vg~LI~iYsi~YM~~d~~~~RFfa~l~lF~~sMl~lVlSdNll~l~~~WE~~gl~SyLLIGfw~~~~~a 154 (606)
T COG1009 75 LSLLMALLVTGVGFLIHLYSIGYMSHDPGLGRFFAYLLLFTGSMLGLVLSDNLLLLFVFWELTGLASYLLIGFWYSRPSA 154 (606)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 78999999999999999997998245998570999999999999999982859999999999999988720002698536
Q ss_pred HCCCCCEEHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 103630002212247899999999999962-0598999987543100012455556666666653202455317999999
Q gi|254780865|r 166 IKASMKAFVVNRIGDLGLILAISAIIYLFH-SVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICL 244 (666)
Q Consensus 166 ~~a~~k~~~~~~~g~~~~l~~i~~l~~~~g-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (666)
T Consensus 155 ~~aA~kAflvtrvGdl~ll~gi~~L~~~~G~~~~~~~l~~~~~~----------------------~~~~~-~~~~~~~l 211 (606)
T COG1009 155 RRAARKAFLVTRVGDLGLLLGIILLYLLTGTTLLSEELFAAALF----------------------ADISP-PLLTLILL 211 (606)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCH----------------------HHHCC-HHHHHHHH
T ss_conf 69998874301126899999999999995763017888621101----------------------12111-28999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999865433432343124000023322100013456666777999963013578134444567777788763001110
Q gi|254780865|r 245 LFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGLV 324 (666)
Q Consensus 245 l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~ 324 (666)
T Consensus 212 ll~~Ga~~KSAQfPfH~WLpdAMegPTPVSAliHaATMV~AGvyLvaR~~pif~~sp~~~~~v~~vG~iTal~~a~~al~ 291 (606)
T COG1009 212 LLLLGAFGKSAQFPFHTWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPEALWLVILVGAVTALLAALIALV 291 (606)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998636633060376553664489849999998688971625796887875357899999999999999999999999
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCC--CCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 24520244321000135334456553--1110034655531000122221012321110000110127761546699999
Q gi|254780865|r 325 QHDIKRVIAYSTCSQLGYMFVALGCR--AYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWM 402 (666)
Q Consensus 325 q~d~Kr~lAySsis~~G~i~~~~g~~--~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~ 402 (666)
T Consensus 292 Q~DiKriLAYSTiSQLG~m~~a~Glg~~a~~aAifHL~tHA~FKA~LFL~aG~vih~-~~trdi~kmggL~k~mPit~~~ 370 (606)
T COG1009 292 QNDIKRILAYSTISQLGYMFVALGLGSLAYEAAIFHLVTHAFFKALLFLSAGSVIHA-TGTRDIRKLGGLRKKMPITFVA 370 (606)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH-CCCCCHHHHHCHHHHCHHHHHH
T ss_conf 999999999988999999999984427799999999999999999999841503887-1654088741678766399999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
Q ss_conf 998864210110000000024432178888889864102--444442102211345433310342457874433210000
Q gi|254780865|r 403 MIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHF--TFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISHK 480 (666)
Q Consensus 403 ~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~--~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~~ 480 (666)
T Consensus 371 ~~ig~lalaGvp------Pf~GF~SK~~i~~~~~~~~~~~~~~~~~~~~i~~~~T~~ys~r~~~~~F~g~~~~~~~~~-~ 443 (606)
T COG1009 371 FLIGALALAGVP------PFAGFFSKDMILEAALAASHLSGGLLLLLALIGALLTAFYSFRLIFLVFFGKPREPEELP-H 443 (606)
T ss_pred HHHHHHHHHCCC------CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-C
T ss_conf 999999981787------320699999999999972543333899999999999999999999951478998744466-7
Q ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 001355333202456566632100000124-67642113455433575333201233688999999-9999999999999
Q gi|254780865|r 481 IHESPLVMQIPLFILAIGSIFFGFIFHDVF-FGSAYSSFWKGALFASSSNNVLERYHEVPLWVEYS-SFIAFFVGFFSAF 558 (666)
Q Consensus 481 ~~e~~~~m~~pl~vLa~~si~~G~~~~~~~-~~~~~~~~~~~~l~~~~~~~~l~~~~~~~l~~~~i-~ll~~iiGi~la~ 558 (666)
T Consensus 444 ~he~p~~m~lp~~iL~~~s~~~G~~~~~~~~~~~~~~-----------~~~~~----~~~l~~~~~~pl~~si~g~~~~~ 508 (606)
T COG1009 444 AHEAPWVMLLPLVVLAILSLILGLLILAPFLFPAVFA-----------ADELL----HLALWHGLNLPLLLSIVGIVLGI 508 (606)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----------CCCCC----CCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7889810459899999999999998765653020103-----------45332----10137752358999999999999
Q ss_pred HHHHHCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99870401246656411258999870578168999999999999999999987557665341549999999999998850
Q gi|254780865|r 559 LMYIICPSLPKFLSEKCRFFYCFLQNAWYFDRIYDCLLVRPIVRLATILWKRVDLSIDKYGPGGIVACVRYLSSYSSRLQ 638 (666)
Q Consensus 559 lly~~~~~~~~~~~~~~~~l~~~l~~~~y~d~lY~~~ivk~~~~ls~~l~~~~D~~i~d~~v~gi~~~v~~~s~~lr~lQ 638 (666)
T Consensus 509 ~~y~~-~~~~~~~~~~~-~~~~~~~~~~~~~~ly~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 585 (606)
T COG1009 509 LLYLK-PILKKSILGLF-GLYTLLYNDYYLDKLYTLVFVKTVALLAGRLWDYFDLTFIDGIVNLG-RVTLFSGNGLRRSQ 585 (606)
T ss_pred HHHHH-HHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCEEEEEC
T ss_conf 99961-56677775100-57899999988998878766898999998899878889886432000-00001353345405
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q ss_conf 96288999999999999999
Q gi|254780865|r 639 TGYLDHYAFSMLIGISILVI 658 (666)
Q Consensus 639 tG~i~~Yi~~i~igl~llli 658 (666)
T Consensus 586 ~g~~~~~~~~~~~~~~~~~~ 605 (606)
T COG1009 586 TGYLQLYALSLVVGALLLLI 605 (606)
T ss_pred CCHHHHHHHHHHHHHHHHHC
T ss_conf 55899999999999999870