HHsearch alignment for GI: 254780865 and conserved domain: MTH00020
>MTH00020 ND5 NADH dehydrogenase subunit 5; Reviewed.
Probab=100.00 E-value=0 Score=1018.85 Aligned_cols=603 Identities=47% Similarity=0.838 Sum_probs=546.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEE
Q ss_conf 79899999999999999730124214789999999999999999999997258985289997531013088223577874
Q gi|254780865|r 4 IYEVIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRI 83 (666)
Q Consensus 4 l~~l~~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~ 83 (666)
T Consensus 1 m~lLii~~Pli~a~i~~l~gr~~~~~~~~~i~~~~~~~s~~~s~~~~~~~~~~~~~--~~~~~~~w~~~~~~~~~~~~~~ 78 (608)
T MTH00020 1 MYLLVLFFPLVGAVLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILLNSST--TYIKLWRWLDSDLLTVYFGLQF 78 (608)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--EEEEEEEEEECCCCCEEEEEEE
T ss_conf 97999999999999999827766840899999999999999999999999738981--6998765212277152787750
Q ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 33789999999999999999974753068886618999999999999999865589999888888568899887620344
Q gi|254780865|r 84 DTLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKE 163 (666)
Q Consensus 84 D~ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~ 163 (666)
T Consensus 79 D~ls~~~~~~v~~is~lv~iYS~~Ym~~d~~~~rf~~~l~lF~~~Ml~lv~s~nl~~lfvgWE~~gl~SylLI~~~~~~~ 158 (608)
T MTH00020 79 DGLVAIMLLVVTTISTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRI 158 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 76599999999999999999999984679981289999999999999999971699999999999999988572316876
Q ss_pred HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 54103630002212247899999999999962059899998754310001245555666666665320245531799999
Q gi|254780865|r 164 SAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIIC 243 (666)
Q Consensus 164 ~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
T Consensus 159 ~a~~aa~ka~l~~rvGd~~~l~~i~~l~~~~gt~~~~~i~~~~~---------------------------~~~~~~~~~ 211 (608)
T MTH00020 159 EANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVA---------------------------PSSDITLIC 211 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC---------------------------CCCHHHHHH
T ss_conf 89999999999998658999999999999827806999998734---------------------------332589999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986543343234312400002332210001345666677799996301357813444456777778876300111
Q gi|254780865|r 244 LLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGL 323 (666)
Q Consensus 244 ~l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al 323 (666)
T Consensus 212 ~~l~~g~~~KsAq~P~h~WLP~Am~aPTPvSALlhaatmV~aGvyll~R~~~~~~~~~~~~~~~~~iG~~T~~~~~~~Al 291 (608)
T MTH00020 212 LLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFDQAPLALIIVTIVGSLTVFFAATVGL 291 (608)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999986407550204566458997058898899997447313530541012778999999999999999999999
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 02452024432100013533445655311100346555310001222210123211100001101277615466999999
Q gi|254780865|r 324 VQHDIKRVIAYSTCSQLGYMFVALGCRAYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMM 403 (666)
Q Consensus 324 ~q~d~Kr~lAySsis~~G~i~~~~g~~~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~ 403 (666)
T Consensus 292 ~Q~DiKkilAyST~SQlG~m~~~~gl~~~~~a~fHl~~Ha~fKalLFl~aG~vih~~~~~qdi~~mggl~~~mP~t~~~~ 371 (608)
T MTH00020 292 VQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLISFLPLTYIMF 371 (608)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHH
T ss_conf 78778887620338688899998501408788999999999999999843599983468503888479413483999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC
Q ss_conf 98864210110000000024432178888889864102444442102211345433310342457874433210000001
Q gi|254780865|r 404 IVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISHKIHE 483 (666)
Q Consensus 404 ~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~~~~e 483 (666)
T Consensus 372 ~i~~lal~G~P------~~~GF~SKd~ile~~~~~~~~~~~~~~~~~~~~lT~~y~~R~~~~~f~g~~~~~~~~~~~~hE 445 (608)
T MTH00020 372 VIGSLSLMGFP------YLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTALYSIRLIYLTFLSNTNLKRAVFFFLHE 445 (608)
T ss_pred HHHHHHHHCCH------HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99999984541------240898799999999866269999999999999999999999999994799999765556676
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35533320245656663210000012467642113455433575333201233688999999999999999999999870
Q gi|254780865|r 484 SPLVMQIPLFILAIGSIFFGFIFHDVFFGSAYSSFWKGALFASSSNNVLERYHEVPLWVEYSSFIAFFVGFFSAFLMYII 563 (666)
Q Consensus 484 ~~~~m~~pl~vLa~~si~~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~l~~~~i~ll~~iiGi~la~lly~~ 563 (666)
T Consensus 446 ~~~~M~~Pl~iLa~~si~~G~l~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~~~l~g~~l~~~~~~~ 508 (608)
T MTH00020 446 GSWNLLLPLGILALGSIFVGYLAKEMIWSFQI-----------------TPFPIVPLSIKLLPVFLSLGGAFLVFFLYFY 508 (608)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87899999999999999999999988716655-----------------3110247999999999999999999999999
Q ss_pred CCH-HHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 401-24665641125899987057816899999999999999999-99875576-6534154999999999999885096
Q gi|254780865|r 564 CPS-LPKFLSEKCRFFYCFLQNAWYFDRIYDCLLVRPIVRLATIL-WKRVDLSI-DKYGPGGIVACVRYLSSYSSRLQTG 640 (666)
Q Consensus 564 ~~~-~~~~~~~~~~~l~~~l~~~~y~d~lY~~~ivk~~~~ls~~l-~~~~D~~i-~d~~v~gi~~~v~~~s~~lr~lQtG 640 (666)
T Consensus 509 ~~~~~~~~~~~~~~~~~~fl~~~wy~d~l~~~~~v~~~~~~~~~~~~~~iD~g~ie~~g~~Gi~~~~~~~s~~l~~~QsG 588 (608)
T MTH00020 509 SSHTFRVPFSFIGRISYTFLYSAWQFNYILNYFLIKKVWKGGHLISYRTIDKGVLELVGPKGISNFLILLTQGLSNLQSG 588 (608)
T ss_pred HHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 87654213311003689998700306889999999999999999999999999999525889999999999998886228
Q ss_pred CHHHHHHHHHHHHHHHHH
Q ss_conf 288999999999999999
Q gi|254780865|r 641 YLDHYAFSMLIGISILVI 658 (666)
Q Consensus 641 ~i~~Yi~~i~igl~llli 658 (666)
T Consensus 589 ~v~~Y~l~~lig~~i~i~ 606 (608)
T MTH00020 589 LVFNYALVILIGVAIFIW 606 (608)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 499999999999999998