HHsearch alignment for GI: 254780865 and conserved domain: MTH00032
>MTH00032 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=1035.81 Aligned_cols=620 Identities=43% Similarity=0.715 Sum_probs=548.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEE
Q ss_conf 79899999999999999730124214789999999999999999999997258985289997531013088223577874
Q gi|254780865|r 4 IYEVIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRI 83 (666)
Q Consensus 4 l~~l~~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~ 83 (666)
T Consensus 1 m~llii~lPl~~~~i~~~~gr~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~--~~~~~~w~~~~~~~~~~~~~~ 78 (677)
T MTH00032 1 MYLLVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEVLINDAVV--HIELYKWIESEIFITHIGLLY 78 (677)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE--EEEEEECCCCCCCCEEEEEEE
T ss_conf 939999999999999998505256035799999999999999999999995589738--999854334567652578775
Q ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 33789999999999999999974753068886618999999999999999865589999888888568899887620344
Q gi|254780865|r 84 DTLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKE 163 (666)
Q Consensus 84 D~ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~ 163 (666)
T Consensus 79 D~ls~~m~~~v~~is~lv~iYS~~Ym~~d~~~~rf~~~l~lF~~~Ml~lV~s~nl~~lfigWE~vgl~SylLI~~~~~r~ 158 (677)
T MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRI 158 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 21179999999999999999968873799985179999999999999999956199999999999999897606268847
Q ss_pred HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 54103630002212247899999999999962059899998754310001245555666666665320245531799999
Q gi|254780865|r 164 SAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIIC 243 (666)
Q Consensus 164 ~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
T Consensus 159 ~a~~aa~ka~i~nrvGd~~~l~gi~~l~~~~gs~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 228 (677)
T MTH00032 159 QANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGIMD----------RGYGEGGAYESPLAPFAIIG 228 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHH----------HHHHHHHHHCCCHHHHHHHH
T ss_conf 89999999999850769999999999999967742998765542256654----------33554332014226899999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986543343234312400002332210001345666677799996301357813444456777778876300111
Q gi|254780865|r 244 LLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGL 323 (666)
Q Consensus 244 ~l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al 323 (666)
T Consensus 229 ~ll~~ga~~KSAq~plh~WLPdAMegPTPVSALiHaatmV~AGvyll~R~~pl~~~~~~~~~~i~~~G~~T~~~~a~~al 308 (677)
T MTH00032 229 ILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGL 308 (677)
T ss_pred HHHHHHHHHHHHHCCCCHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998874106162206787558996047887999999899999997403443199999999999999999999998
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCC-CCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCCCHHHHH
Q ss_conf 02452024432100013533445655-31110034655531000122221012321110-00011012776154669999
Q gi|254780865|r 324 VQHDIKRVIAYSTCSQLGYMFVALGC-RAYGASIFHLFTHAFFKALLFLGSGSVIHAVA-GEQDMRRMGGLYPHLPRTCW 401 (666)
Q Consensus 324 ~q~d~Kr~lAySsis~~G~i~~~~g~-~~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~-~~~~i~~~gGl~~~~P~~~~ 401 (666)
T Consensus 309 ~Q~DiKrilAyST~SQlGym~~~~Gl~g~~~~a~fHl~~Ha~fKalLFl~aG~vih~~~~~~qd~r~mGgl~~~mP~t~~ 388 (677)
T MTH00032 309 VQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYT 388 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHH
T ss_conf 77315588887368889999999722207999999999899999999970228887047435689985897345649999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC------------------------------------CCCCC
Q ss_conf 999886421011000000002443217888888986410------------------------------------24444
Q gi|254780865|r 402 MMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSH------------------------------------FTFVF 445 (666)
Q Consensus 402 ~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~------------------------------------~~~~~ 445 (666)
T Consensus 389 ~~~i~~lal~G~P------~~~GF~SKd~ile~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (677)
T MTH00032 389 MMLIGSFSIMGLP------YLTGFYSKDLILELTYSGRNMGIPFGSSLLSIEGDIEIKKGGIRPWGGAGLSPSRGSAFAF 462 (677)
T ss_pred HHHHHHHHHCCCC------CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHCCCCHHHHHHH
T ss_conf 9999999980686------2011420799999998601345431110011110000012221100000013340249999
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH--HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 421022113454333103424578744332100--000013553332024565666321000001246764211345543
Q gi|254780865|r 446 FLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDIS--HKIHESPLVMQIPLFILAIGSIFFGFIFHDVFFGSAYSSFWKGAL 523 (666)
Q Consensus 446 ~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~--~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~~~~~~~~~~~~~l 523 (666)
T Consensus 463 ~l~~~aa~LTa~YS~RLifltF~g~pn~~~~~~~~~~~~~~~~~ml~pL~iLa~gsIf~G~l~~~~fig~~--------- 533 (677)
T MTH00032 463 WLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDILIGDI--------- 533 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------
T ss_conf 99999999999999999999981689999766576766767788999999999999999999988745777---------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-----HHHHCCHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 35753332012336889999999999999999999998704012466-----5641125899987057816899999999
Q gi|254780865|r 524 FASSSNNVLERYHEVPLWVEYSSFIAFFVGFFSAFLMYIICPSLPKF-----LSEKCRFFYCFLQNAWYFDRIYDCLLVR 598 (666)
Q Consensus 524 ~~~~~~~~l~~~~~~~l~~~~i~ll~~iiGi~la~lly~~~~~~~~~-----~~~~~~~l~~~l~~~~y~d~lY~~~ivk 598 (666)
T Consensus 534 ----------~~~~~p~~iK~lPl~l~l~Gi~la~~~~~~~~~l~~~~~~~~~~~~~~~ly~FL~nkWyFD~Lyn~~iv~ 603 (677)
T MTH00032 534 ----------EHPIVPPLIKVMPTLMGLFGMGLCLWAQKGTRELLLWGFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAI 603 (677)
T ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ----------6563079999999999999999999999999999875002001244308999987134239899889999
Q ss_pred HHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999-99987557-6653415499999999999988509628899999999999999999
Q gi|254780865|r 599 PIVRLATI-LWKRVDLS-IDKYGPGGIVACVRYLSSYSSRLQTGYLDHYAFSMLIGISILVIVM 660 (666)
Q Consensus 599 ~~~~ls~~-l~~~~D~~-i~d~~v~gi~~~v~~~s~~lr~lQtG~i~~Yi~~i~igl~llli~~ 660 (666)
T Consensus 604 p~l~lG~~~~~K~iD~GwIE~~GPqGI~~~~~~lS~~l~~lQSG~I~~YAlimL~~~~Ifltl~ 667 (677)
T MTH00032 604 PLFSFGHWGIYKTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLLSFTIIFLALW 667 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999827699944679999999999998586231759999999999999999999