HHsearch alignment for GI: 254780865 and conserved domain: MTH00095
>MTH00095 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=692.48 Aligned_cols=387 Identities=30% Similarity=0.474 Sum_probs=347.3
Q ss_pred CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23577874337899999999999999999747530688866189999999999999998655899998888885688998
Q gi|254780865|r 76 DIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLL 155 (666)
Q Consensus 76 ~~~~~~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~L 155 (666)
T Consensus 36 ~~s~~f~fd~~Sl~F~~~v~~Is~~V~~YS~~YM~~d~~~~rF~~~l~lFi~SMl~LV~S~nll~l~lgWE~lGl~SylL 115 (527)
T MTH00095 36 FLSFKFNFYFNSLLFSLILLLVFFSVLVFSTYYMDGELNFNYFYFVLLIFVGSMFLLIFSNSVFTMLLSWDLLGISSFFL 115 (527)
T ss_pred CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44322009987899999999999999999899727998914999999999999999999802999999999999999999
Q ss_pred HHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 87620344541036300022122478999999999999620598999987543100012455556666666653202455
Q gi|254780865|r 156 IGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHP 235 (666)
Q Consensus 156 i~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (666)
T Consensus 116 I~fy~~-~~s~~aa~~t~l~nRiGD~~ll~~~~~~~~~~~~~~~~----------------------------------- 159 (527)
T MTH00095 116 VLFYNN-WNSCSGAMNTVLTNRLGDFFIFLFFSGFIFSSYYFLSF----------------------------------- 159 (527)
T ss_pred HHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------
T ss_conf 820698-88999999999999999999999999999997899988-----------------------------------
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 31799999999999865433432343124000023322100013456666777999963013578134444567777788
Q gi|254780865|r 236 HDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITA 315 (666)
Q Consensus 236 ~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~ 315 (666)
T Consensus 160 ~~~~~~~~~ll~i~a~tKSAQfPfh~WLP~AM~APTPVSALvHSsTlVtAGVyLliR~~~~~-~~~~~~~~ll~iG~lT~ 238 (527)
T MTH00095 160 SFFSSSMSLMLLLASFTKSAQFPFSSWLPKAMAAPTPVSSLVHSSTLVTAGLYLLMNFSYPL-MNKNVLKIMLLIGLFTM 238 (527)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999842065623246761799936799977899998999999999998-23899999999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76300111024520244321000135334456553111003465553100012222101232111000011012776154
Q gi|254780865|r 316 FFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPH 395 (666)
Q Consensus 316 ~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~ 395 (666)
T Consensus 239 ~~~~l~Al~q~DiKkilAySTlSQLG~M~~~lGlG~~~la~fHL~~HA~FKalLFL~aG~iIh~~~g~QDiR~mggl~~~ 318 (527)
T MTH00095 239 FFSSLSALVEEDLKKVVALSTLSQMGFSMLTFGSGLSFLSFFHLLSHALFKSCLFMQVGYLIHCMFGQQDGRNYSNLGNL 318 (527)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
T ss_conf 99999998476589999999898999999999856699999999999999999999778999836994178986586655
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 66999999988642101100000000244321788888898641024444421022113454333103424578744332
Q gi|254780865|r 396 LPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDK 475 (666)
Q Consensus 396 ~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~ 475 (666)
T Consensus 319 ~p~~~~~~~i~~lsL~G~P------flsGFySKD~ILe~~~~~~~~~~~~~l~~~s~~lT~~YS~Rl~~~~f~~~~~~-- 390 (527)
T MTH00095 319 PVFIQLQMLVTLFCLCGLF------FTSGFVSKEFILELFFSNSFMIFFSFMFFFSVFLTFGYSYRLWKSFFLSFSKS-- 390 (527)
T ss_pred CHHHHHHHHHHHHHHHCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--
T ss_conf 3899999999999985543------53289889999999998118999999999999999999999999999266764--
Q ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 10000001355333202456566632100000124
Q gi|254780865|r 476 DISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVF 510 (666)
Q Consensus 476 ~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~ 510 (666)
T Consensus 391 ---~~~~~~~~~~~~~~~~l~~~si~f~~~~~~~~ 422 (527)
T MTH00095 391 ---VYNYSSSVVMNFLSLLLVFFSIFFLWWWNFNM 422 (527)
T ss_pred ---CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---30002218999999999999999999999999