HHsearch alignment for GI: 254780865 and conserved domain: MTH00112
>MTH00112 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=381.21 Aligned_cols=298 Identities=19% Similarity=0.297 Sum_probs=245.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 99999999999998655899998888885688998876203445410363000221224789999999999996205989
Q gi|254780865|r 121 YLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFD 200 (666)
Q Consensus 121 ~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~ 200 (666)
T Consensus 8 ~~~~lilG~~~~~sS~~~~~~wvglEl~~ls~~~Li~~-~~~~~s~Ea~~KYFl~~~~~S~~~L~g~~l~y~~tg~~~i~ 86 (345)
T MTH00112 8 ITTSLILGTLITISSNHWLLAWTGLEINTLAIIPLISK-SHHPRAIEAATKYFLTQAAASALILFSSTTNAWNTGQWDIT 86 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 99999999999999989999999999999999999986-99951899999999999999999999999999998380676
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHH
Q ss_conf 99987543100012455556666666653202455317999999999998654334323431240000233221000134
Q gi|254780865|r 201 AVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAA 280 (666)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAllhs~ 280 (666)
T Consensus 87 ~~~~~-----------------------------------~~~~li~~~l~~Klg~~PfH~W~Pdv~~g~~~~~~~~ls- 130 (345)
T MTH00112 87 QLTNP-----------------------------------TSCTILTLALAMKLGLAPFHFWLPEVLQGSTTTTALILL- 130 (345)
T ss_pred HHCCH-----------------------------------HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHH-
T ss_conf 52126-----------------------------------899999999999981342441099998579688999999-
Q ss_pred HHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 566667779999-6301357813444456777778876300111024520244321000135334456553111003465
Q gi|254780865|r 281 TMVTAGVFLVAR-MSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYGASIFHL 359 (666)
Q Consensus 281 ~mv~~Gvy~l~r-~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~~~a~~~~ 359 (666)
T Consensus 131 t~~Kia~~~il~~~~~~~-----~~~il~~~~~lS~~vG~~~al~Q~~iKrlLAYSSIsh~G~ml~~l~~~~-~~~~~~~ 204 (345)
T MTH00112 131 TWQKLAPLTLLLMTSNSL-----NTTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYAP-KLTLLTF 204 (345)
T ss_pred HHHHHHHHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_conf 999999999999982221-----0499999999999999999984200899999999999999999999869-9999999
Q ss_pred HHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55310001222210123211100001101277615466999999988642101100000000244321788888898641
Q gi|254780865|r 360 FTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSS 439 (666)
Q Consensus 360 ~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~ 439 (666)
T Consensus 205 ~~Y~i~~~~~f~~~~-----~~~~~~i~~l~~l~~~~p~~~~~~~i~llSLaGlP------P~~GF~~K~~i~~~~i~~~ 273 (345)
T MTH00112 205 YLYIIMTTTMFLTLN-----TTSTKTIKDMGTSWTKSPMLNATLMLTLLSLAGLP------PLTGFMPKWLILQELTKQN 273 (345)
T ss_pred HHHHHHHHHHHHHHH-----HHCCCCHHHHHCCHHCCHHHHHHHHHHHHHCCCCC------CCCHHHHHHHHHHHHHHCC
T ss_conf 999999999999999-----97677599872824100999999999998726565------2115889999999999848
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 0244444210221134543331034245787443
Q gi|254780865|r 440 HFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRV 473 (666)
Q Consensus 440 ~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~ 473 (666)
T Consensus 274 ~~-~l~~i~il~S~isl~yYlRi~y~~~~~~~~~ 306 (345)
T MTH00112 274 MT-PTATTMAMLSLLSLFFYLRLAYYSTITLPPN 306 (345)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 49-9999999999999999999999999867999