HHsearch alignment for GI: 254780865 and conserved domain: MTH00160
>MTH00160 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=357.84 Aligned_cols=322 Identities=19% Similarity=0.307 Sum_probs=257.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999986558999988888856889988762034454103630002212247899999999999962059
Q gi|254780865|r 119 FSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVD 198 (666)
Q Consensus 119 ~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~ 198 (666)
T Consensus 7 ~i~~~~~~~g~l~~~ss~~~~~lwv~lEi~~l~~~~l~~-~~~~~~s~ea~~KYfi~q~~~S~~~L~~~~~~~~~~~~~~ 85 (336)
T MTH00160 7 ILFLSTLILGTLISISSNSWFGAWMGLEINLLSFIPLIS-NKKNLLSSESSLKYFLIQALASSMLLFSIILMMLNSFFNN 85 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999998999999999999999999998-4899417999999999999999999999999999987778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHH
Q ss_conf 89999875431000124555566666666532024553179999999999986543343234312400002332210001
Q gi|254780865|r 199 FDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIH 278 (666)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAllh 278 (666)
T Consensus 86 ~-----------------------------------------~~~~li~~~l~~Klg~~PfH~Wlpdv~~~~~~~~~~~l 124 (336)
T MTH00160 86 S-----------------------------------------FSSMMINSSLLLKLGAAPFHFWFPSVMEGLSWINCFIL 124 (336)
T ss_pred H-----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 9-----------------------------------------99999999999998640288659999847878999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 34566667779999630135781344445677777887630011102452024432100013533445655311100346
Q gi|254780865|r 279 AATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYGASIFH 358 (666)
Q Consensus 279 s~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~~~a~~~ 358 (666)
T Consensus 125 st~~Ki~pl~~l~~~~-------~~~~~l~~~~~lS~~~G~~~al~q~~iKrllaySSI~~~G~ml~~~~~~~~~~-~~y 196 (336)
T MTH00160 125 MTWQKIAPLILLSYII-------NINSFIIILIILSAIIGALGGLNQTSLRKLLAYSSINHLGWMLSAMMISENLW-LIY 196 (336)
T ss_pred HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_conf 9999999999999998-------57899999999999999998774777899999988988999999999869999-999
Q ss_pred HHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55531000122221012321110000110127761546699999998864210110000000024432178888889864
Q gi|254780865|r 359 LFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTS 438 (666)
Q Consensus 359 ~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~ 438 (666)
T Consensus 197 ~~~Y~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~i~~lSL~GiP------P~~GF~~K~~ii~~~~~~ 265 (336)
T MTH00160 197 FLIYSIISLSII----LLFN-KFNIFHLNQLFNSMNMSKIIKFLLFLNLLSLGGLP------PFLGFFPKWIVIQFLILN 265 (336)
T ss_pred HHHHHHHHHHHH----HHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHHHHC
T ss_conf 999999999999----9998-83644699886554314999999999998766885------141689999999999983
Q ss_pred HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 1024444421022113454333103424578744332100000013553332024565666321000
Q gi|254780865|r 439 SHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISHKIHESPLVMQIPLFILAIGSIFFGFI 505 (666)
Q Consensus 439 ~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~ 505 (666)
T Consensus 266 ~~~-~l~~~~il~S~is~~yYlri~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l~i~~~~~ 328 (336)
T MTH00160 266 NMY-FLLFILIMSSLITLYFYLRISYSSFMLNYSENK---WNLNKKNKSMILSLLILSFISIFGLIF 328 (336)
T ss_pred CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 729-999999999999999999999999975898753---156405427999999999999999888